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Papers authored by Wakana S

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Introduction to the Japan Mouse Clinic at the RIKEN BioResource Center.

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Wakana S, Suzuki T, Furuse T, Kobayashi K, Miura I, Kaneda H, Yamada I, Motegi H, Toki H, Inoue M, Minowa O, Noda T, Waki K, Tanaka N, Masuya H, and Obata Y

Experimental animals / Japanese Association for Laboratory Animal Science 58(5):443-50, 2009 Oct - Who cited this? | PubMed ID: 19897927 | Fulltext

A novel gene essential for the development of single positive thymocytes.

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Kakugawa K, Yasuda T, Miura I, Kobayashi A, Fukiage H, Satoh R, Matsuda M, Koseki H, Wakana S, Kawamoto H, and Yoshida H

Molecular and cellular biology 29(18):5128-35, 2009 Sep - Who cited this? | PubMed ID: 19620281 | Fulltext

Mapping of Functional Areas in the Human Cortex Based on Connectivity through Association Fibers.

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Hua K, Oishi K, Zhang J, Wakana S, Yoshioka T, Zhang W, Akhter KD, Li X, Huang H, Jiang H, van Zijl P, and Mori S

Cerebral cortex (New York, N.Y. : 1991) 19(8):1889-95, 2009 Aug - Who cited this? | PubMed ID: 19068488 | Fulltext

PosMed (Positional Medline): prioritizing genes with an artificial neural network comprising medical documents to accelerate positional cloning.

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Yoshida Y, Makita Y, Heida N, Asano S, Matsushima A, Ishii M, Mochizuki Y, Masuya H, Wakana S, Kobayashi N, and Toyoda T

Nucleic acids research 37(Web Server issue):W147-52, 2009 Jul 1 - Who cited this? | PubMed ID: 19468046 | Fulltext

A practical novel method for ensuring stable capacitation of spermatozoa from cryopreserved C57BL/6J sperm suspension.

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Taguma K, Nakamura C, Ozaki A, Suzuki C, Hachisu A, Kobayashi K, Mochida K, Ogura A, Kaneda H, and Wakana S

Experimental animals / Japanese Association for Laboratory Animal Science 58(4):395-401, 2009 Jul - Who cited this? | PubMed ID: 19654437 | Fulltext

A high-speed congenic strategy using first-wave male germ cells.

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Ogonuki N, Inoue K, Hirose M, Miura I, Mochida K, Sato T, Mise N, Mekada K, Yoshiki A, Abe K, Kurihara H, Wakana S, and Ogura A

PLoS ONE 4(3):e4943, 2009 - Who cited this? | PubMed ID: 19333383 | Fulltext

Identification and characterization of new long conserved noncoding sequences in vertebrates.

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Sakuraba Y, Kimura T, Masuya H, Noguchi H, Sezutsu H, Takahasi KR, Toyoda A, Fukumura R, Murata T, Sakaki Y, Yamamura M, Wakana S, Noda T, Shiroishi T, and Gondo Y

Mammalian genome : official journal of the International Mammalian Genome Society 19(10-12):703-12, 2008 Dec - Who cited this? | PubMed ID: 19015917 | Fulltext

Objective evaluation measures of genetic marker selection in large-scale SNP genotyping.

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Kaminuma E, Masuya H, Miura I, Motegi H, Takahasi KR, Nakazawa M, Matsui M, Gondo Y, Noda T, Shiroishi T, Wakana S, and Toyoda T

Journal of bioinformatics and computational biology 6(5):905-17, 2008 Oct - Who cited this? | PubMed ID: 18942158 | Fulltext

Tract probability maps in stereotaxic spaces: Analyses of white matter anatomy and tract-specific quantification.

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Hua K, Zhang J, Wakana S, Jiang H, Li X, Reich DS, Calabresi PA, Pekar JJ, van Zijl PC, and Mori S

NeuroImage 39(1):336-47, 2008 Jan 1 - Who cited this? | PubMed ID: 17931890 | Fulltext

Mutations in the helix termination motif of mouse type I IRS keratin genes impair the assembly of keratin intermediate filament.

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Tanaka S, Miura I, Yoshiki A, Kato Y, Yokoyama H, Shinogi A, Masuya H, Wakana S, Tamura M, and Shiroishi T

Genomics 90(6):703-11, 2007 Dec - Who cited this? | PubMed ID: 17920809 | Fulltext

Phenosite: a web database integrating the mouse phenotyping platform and the experimental procedures in mice.

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Masuya H, Yoshikawa S, Heida N, Toyoda T, Wakana S, and Shiroishi T

Journal of bioinformatics and computational biology 5(6):1173-91, 2007 Dec - Who cited this? | PubMed ID: 18172924 | Fulltext

Evidence of slow maturation of the superior longitudinal fasciculus in early childhood by diffusion tensor imaging.

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Zhang J, Evans A, Hermoye L, Lee SK, Wakana S, Zhang W, Donohue P, Miller MI, Huang H, Wang X, van Zijl PC, and Mori S

NeuroImage 38(2):239-47, 2007 Nov 1 - Who cited this? | PubMed ID: 17826183 | Fulltext

A novel dominant-negative mutation in Gdf5 generated by ENU mutagenesis impairs joint formation and causes osteoarthritis in mice.

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Masuya H, Nishida K, Furuichi T, Toki H, Nishimura G, Kawabata H, Yokoyama H, Yoshida A, Tominaga S, Nagano J, Shimizu A, Wakana S, Gondo Y, Noda T, Shiroishi T, and Ikegawa S

Human molecular genetics 16(19):2366-75, 2007 Oct 1 - Who cited this? | PubMed ID: 17656374 | Fulltext

An optimal embryo transfer condition for the effective production of DBA/2J mice.

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Kaneda H, Taguma K, Suzuki C, Ozaki A, Nakamura C, Hachisu A, Kobayashi K, Wakana S, and Shiroishi T

Experimental animals / Japanese Association for Laboratory Animal Science 56(5):385-8, 2007 Oct - Who cited this? | PubMed ID: 18075200 | Fulltext

Diffusion tensor imaging in children with periventricular leukomalacia: variability of injuries to white matter tracts.

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Nagae LM, Hoon AH, Stashinko E, Lin D, Zhang W, Levey E, Wakana S, Jiang H, Leite CC, Lucato LT, van Zijl PC, Johnston MV, and Mori S

AJNR. American journal of neuroradiology 28(7):1213-22, 2007 Aug - Who cited this? | PubMed ID: 17698519 | Fulltext

Reproducibility of quantitative tractography methods applied to cerebral white matter.

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Wakana S, Caprihan A, Panzenboeck MM, Fallon JH, Perry M, Gollub RL, Hua K, Zhang J, Jiang H, Dubey P, Blitz A, van Zijl P, and Mori S

NeuroImage 36(3):630, 2007 Jul 1 - Who cited this? | PubMed ID: 17481925 | Fulltext

A series of ENU-induced single-base substitutions in a long-range cis-element altering Sonic hedgehog expression in the developing mouse limb bud.

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Masuya H, Sezutsu H, Sakuraba Y, Sagai T, Hosoya M, Kaneda H, Miura I, Kobayashi K, Sumiyama K, Shimizu A, Nagano J, Yokoyama H, Kaneko S, Sakurai N, Okagaki Y, Noda T,

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Genomics 89(2):207-14, 2007 Feb - Who cited this? | PubMed ID: 17049204 | Fulltext

White and gray matter development in human fetal, newborn and pediatric brains.

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Huang H, Zhang J, Wakana S, Zhang W, Ren T, Richards LJ, Yarowsky P, Donohue P, Graham E, van Zijl PC, and Mori S

NeuroImage 33(1):27-38, 2006 Oct 15 - Who cited this? | PubMed ID: 16905335 | Fulltext

Pediatric diffusion tensor imaging: normal database and observation of the white matter maturation in early childhood.

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Hermoye L, Saint-Martin C, Cosnard G, Lee SK, Kim J, Nassogne MC, Menten R, Clapuyt P, Donohue PK, Hua K, Wakana S, Jiang H, van Zijl PC, and Mori S

NeuroImage 29(2):493-504, 2006 Jan 15 - Who cited this? | PubMed ID: 16194615 | Fulltext

Diffusion tensor-based imaging reveals occult abnormalities in adrenomyeloneuropathy.

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Dubey P, Fatemi A, Huang H, Nagae-Poetscher L, Wakana S, Barker PB, van Zijl P, Moser HW, Mori S, and Raymond GV

Annals of neurology 58(5):758-66, 2005 Nov - Who cited this? | PubMed ID: 16240348 | Fulltext

Implementation of the modified-SHIRPA protocol for screening of dominant phenotypes in a large-scale ENU mutagenesis program.

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Masuya H, Inoue M, Wada Y, Shimizu A, Nagano J, Kawai A, Inoue A, Kagami T, Hirayama T, Yamaga A, Kaneda H, Kobayashi K, Minowa O, Miura I, Gondo Y, Noda T,

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Mammalian genome : official journal of the International Mammalian Genome Society 16(11):829-37, 2005 Nov - Who cited this? | PubMed ID: 16284798 | Fulltext

Molecular characterization of ENU mouse mutagenesis and archives.

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Sakuraba Y, Sezutsu H, Takahasi KR, Tsuchihashi K, Ichikawa R, Fujimoto N, Kaneko S, Nakai Y, Uchiyama M, Goda N, Motoi R, Ikeda A, Karashima Y, Inoue M, Kaneda H, Masuya H,

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Biochemical and biophysical research communications 336(2):609-16, 2005 Oct 21 - Who cited this? | PubMed ID: 16139793 | Fulltext

DTI tractography based parcellation of white matter: application to the mid-sagittal morphology of corpus callosum.

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Huang H, Zhang J, Jiang H, Wakana S, Poetscher L, Miller MI, van Zijl PC, Hillis AE, Wytik R, and Mori S

NeuroImage 26(1):195-205, 2005 May 15 - Who cited this? | PubMed ID: 15862219 | Fulltext

Meg1/Grb10 overexpression causes postnatal growth retardation and insulin resistance via negative modulation of the IGF1R and IR cascades.

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Shiura H, Miyoshi N, Konishi A, Wakisaka-Saito N, Suzuki R, Muguruma K, Kohda T, Wakana S, Yokoyama M, Ishino F, and Kaneko-Ishino T

Biochemical and biophysical research communications 329(3):909-16, 2005 Apr 15 - Who cited this? | PubMed ID: 15752742 | Fulltext

Enamelin (Enam) is essential for amelogenesis: ENU-induced mouse mutants as models for different clinical subtypes of human amelogenesis imperfecta (AI).

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Masuya H, Shimizu K, Sezutsu H, Sakuraba Y, Nagano J, Shimizu A, Fujimoto N, Kawai A, Miura I, Kaneda H, Kobayashi K, Ishijima J, Maeda T, Gondo Y, Noda T, Wakana S,

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Human molecular genetics 14(5):575-83, 2005 Mar 1 - Who cited this? | PubMed ID: 15649948 | Fulltext

Deleted in polyposis 1-like 1 gene (Dp1l1): a novel gene richly expressed in retinal ganglion cells.

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Sato H, Tomita H, Nakazawa T, Wakana S, and Tamai M

Investigative ophthalmology & visual science 46(3):791-6, 2005 Mar - Who cited this? | PubMed ID: 15728532 | Fulltext

Macroscopic orientation component analysis of brain white matter and thalamus based on diffusion tensor imaging.

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Wakana S, Nagae-Poetscher LM, Jiang H, van Zijl P, Golay X, and Mori S

Magnetic resonance in medicine : official journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine 53(3):649-57, 2005 Mar - Who cited this? | PubMed ID: 15723403 | Fulltext

High-resolution diffusion tensor imaging of the brain stem at 3 T.

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Nagae-Poetscher LM, Jiang H, Wakana S, Golay X, van Zijl PC, and Mori S

AJNR. American journal of neuroradiology 25(8):1325-30, 2004 Sep - Who cited this? | PubMed ID: 15466326 | Fulltext

Influence of H2 complex and non-H2 genes on progression of cutaneous lesions in mice infected with Leishmania amazonensis.

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Terabe M, Wakana S, Katakura K, Onodera T, Matsumoto Y, and Ito M

Parasitology international 53(3):217-21, 2004 Sep - Who cited this? | PubMed ID: 15468528 | Fulltext

A series of maturity onset diabetes of the young, type 2 (MODY2) mouse models generated by a large-scale ENU mutagenesis program.

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Inoue M, Sakuraba Y, Motegi H, Kubota N, Toki H, Matsui J, Toyoda Y, Miwa I, Terauchi Y, Kadowaki T, Shigeyama Y, Kasuga M, Adachi T, Fujimoto N, Matsumoto R, Tsuchihashi K,

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Human molecular genetics 13(11):1147, 2004 Jun 1 - Who cited this? | PubMed ID: 15102714 | Fulltext

Differential geographic patterns of mitochondrial DNA variation in two sympatric species of Japanese wood mice, Apodemus speciosus and A. argenteus.

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Suzuki H, Yasuda SP, Sakaizumi M, Wakana S, Motokawa M, and Tsuchiya K

Genes & genetic systems 79(3):165-76, 2004 Jun - Who cited this? | PubMed ID: 15329497 | Fulltext

Development and implementation of a database system to manage a large-scale mouse ENU-mutagenesis program.

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Masuya H, Nakai Y, Motegi H, Niinaya N, Kida Y, Kaneko Y, Aritake H, Suzuki N, Ishii J, Koorikawa K, Suzuki T, Inoue M, Kobayashi K, Toki H, Wada Y, Kaneda H,

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Mammalian genome : official journal of the International Mammalian Genome Society 15(5):404-11, 2004 May - Who cited this? | PubMed ID: 15170230 | Fulltext

The D5Mit7 locus on mouse chromosome 5 provides resistance to gamma-ray-induced but not N-methyl-N-nitrosourea-induced thymic lymphomas.

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Kodama Y, Yoshikai Y, Tamura Y, Wakana S, Takagi R, Niwa O, and Kominami R

Carcinogenesis 25(1):143-8, 2004 Jan - Who cited this? | PubMed ID: 14514657 | Fulltext

Fiber tract-based atlas of human white matter anatomy.

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Wakana S, Jiang H, Nagae-Poetscher LM, van Zijl PC, and Mori S

Radiology 230(1):77-87, 2004 Jan - Who cited this? | PubMed ID: 14645885 | Fulltext

Phylogenetic conservation of a limb-specific, cis-acting regulator of Sonic hedgehog ( Shh).

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Sagai T, Masuya H, Tamura M, Shimizu K, Yada Y, Wakana S, Gondo Y, Noda T, and Shiroishi T

Mammalian genome : official journal of the International Mammalian Genome Society 15(1):23-34, 2004 Jan - Who cited this? | PubMed ID: 14727139 | Fulltext

A small deletion hotspot in the type II keratin gene mK6irs1/Krt2-6g on mouse chromosome 15, a candidate for causing the wavy hair of the caracul (Ca) mutation.

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Kikkawa Y, Oyama A, Ishii R, Miura I, Amano T, Ishii Y, Yoshikawa Y, Masuya H, Wakana S, Shiroishi T, Taya C, and Yonekawa H

Genetics 165(2):721-33, 2003 Oct - Who cited this? | PubMed ID: 14573483 | Fulltext

Mutations in a new scaffold protein Sans cause deafness in Jackson shaker mice.

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Kikkawa Y, Shitara H, Wakana S, Kohara Y, Takada T, Okamoto M, Taya C, Kamiya K, Yoshikawa Y, Tokano H, Kitamura K, Shimizu K, Wakabayashi Y, Shiroishi T, Kominami R, and Yonekawa H

Human molecular genetics 12(5):453-61, 2003 Mar 1 - Who cited this? | PubMed ID: 12588793 | Fulltext

Novel mRNA molecules are induced in hypertrophied ventricles of carnitine-deficient mice and belong to a family of up-regulated gene in cells overexpressing c-erbB-2.

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Fukumaru S, Horiuchi M, Kobayashi K, Jalil MA, Iijima M, Masuda M, Begum L, Higashi M, Wakana S, Kanzaki T, and Saheki T

Biochimica et biophysica acta 1577(3):437-44, 2002 Sep 27 - Who cited this? | PubMed ID: 12359334 | Fulltext

Two novel tumor suppressor gene loci on chromosome 6q and 15q in human osteosarcoma identified through comparative study of allelic imbalances in mouse and man.

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Nathrath MH, Kuosaite V, Rosemann M, Kremer M, Poremba C, Wakana S, Yanagi M, Nathrath WB, Höfler H, Imai K, and Atkinson MJ

Oncogene 21(38):5975-80, 2002 Aug 29 - Who cited this? | PubMed ID: 12185601 | Fulltext

Mouse H2 haplotype influences on the survival rate after Angiostrongylus costaricensis infection.

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Ohno T, Ishih A, Wakana S, Nishimura M, and Terada M

Experimental parasitology 100(2):140-2, 2002 Feb - Who cited this? | PubMed ID: 12054705 | Fulltext

Reduced sensitivity to and ras mutation spectrum of N-ethyl-N-nitrosourea-induced thymic lymphomas in adult C.B-17 scid mice.

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Nishimura M, Kakinuma S, Wakana S, Mukaigawara A, Mita K, Sado T, Ogiu T, and Shimada Y

Mutation research 486(4):275-83, 2001 Sep 4 - Who cited this? | PubMed ID: 11516930 | Fulltext

Microsatellite database for MSM/Ms and JF1/Ms, molossinus-derived inbred strains.

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Kikkawa Y, Miura I, Takahama S, Wakana S, Yamazaki Y, Moriwaki K, Shiroishi T, and Yonekawa H

Mammalian genome : official journal of the International Mammalian Genome Society 12(9):750-2, 2001 Sep - Who cited this? | PubMed ID: 11641725 | Fulltext

Genetic loci controlling susceptibility to gamma-ray-induced thymic lymphoma.

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Saito Y, Ochiai Y, Kodama Y, Tamura Y, Togashi T, Kosugi-Okano H, Miyazawa T, Wakabayashi Y, Hatakeyama K, Wakana S, Niwa O, and Kominami R

Oncogene 20(37):5243-7, 2001 Aug 23 - Who cited this? | PubMed ID: 11526516 | Fulltext

Overexpression of human H-ras transgene is responsible for tumors induced by chemical carcinogens in mice.

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Maruyama C, Tomisawa M, Wakana S, Yamazaki H, Kijima H, Suemizu H, Ohnishi Y, Urano K, Hioki K, Usui T, Nakamura M, Tsuchida T, Mitsumori K, Nomura T, Tamaoki N, and Ueyama Y

Oncology reports 8(2):233-7, 2001 - Who cited this? | PubMed ID: 11182032 | Fulltext

The eye lens aplasia (elap) maps to mouse chromosome 2.

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Aso S, Ishikawa A, Wakana S, Baba R, Fujita M, and Namikawa T

Experimental animals / Japanese Association for Laboratory Animal Science 50(1):97-8, 2001 Jan - Who cited this? | PubMed ID: 11326432 | Fulltext

Genomic organization and mapping of mouse CDV (carnitine deficiency-associated gene expressed in ventricle)-1 and its related CDV-1R gene.

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Higashi M, Kobayashi K, Iijima M, Wakana S, Horiuchi M, Yasuda T, Yoshida G, Kanmura Y, and Saheki T

Mammalian genome : official journal of the International Mammalian Genome Society 11(12):1053-7, 2000 Dec - Who cited this? | PubMed ID: 11130971 | Fulltext

Radiation-associated loss of heterozygosity at the Znfn1a1 (Ikaros) locus on chromosome 11 in murine thymic lymphomas.

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Shimada Y, Nishimura M, Kakinuma S, Okumoto M, Shiroishi T, Clifton KH, and Wakana S

Radiation research 154(3):293-300, 2000 Sep - Who cited this? | PubMed ID: 10956435 | Fulltext

Suppression of insulitis and diabetes in B cell-deficient mice treated with streptozocin: B cells are essential for the TCR clonotype spreading of islet-infiltrating T cells.

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Kondo S, Iwata I, Anzai K, Akashi T, Wakana S, Ohkubo K, Katsuta H, Ono J, Watanabe T, Niho Y, and Nagafuchi S

International immunology 12(7):1075-83, 2000 Jul - Who cited this? | PubMed ID: 10882419 | Fulltext

YAC/BAC-based physical and transcript mapping around the gracile axonal dystrophy (gad) locus identifies Uchl1, Pmx2b, Atp3a2, and Hip2 genes.

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Wang Y, Saigoh K, Osaka H, Yamanishi T, Suh J, Kiyosawa H, Sakai Y, Wakana S, and Wada K

Genomics 66(3):333-6, 2000 Jun 15 - Who cited this? | PubMed ID: 10873389 | Fulltext

Selective breeding of house musk shrew (Suncus murinus) lines in relation to emesis induced by veratrine sulfate.

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Ebukuro S, Wakana S, Hioki K, and Nomura T

Comparative medicine 50(3):281-3, 2000 Jun - Who cited this? | PubMed ID: 10894492 | Fulltext

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