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Papers authored by Vadigepalli R

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Structural properties of gene regulatory networks: definitions and connections.

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Narasimhan S, Rengaswamy R, and Vadigepalli R

IEEE/ACM transactions on computational biology and bioinformatics / IEEE, ACM 6(1):158-70, 2009 - Who cited this? | PubMed ID: 19179709 | Fulltext

Temporal and functional profile of the transcriptional regulatory network in the early regenerative response to partial hepatectomy in the rat.

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Juskeviciute E, Vadigepalli R, and Hoek JB

BMC genomics 9(1):527, 2008 Nov 6 - Who cited this? | PubMed ID: 18990226 | Fulltext

Dynamic transcriptomic response to acute hypertension in the nucleus tractus solitarius.

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Khan RL, Vadigepalli R, McDonald MK, Rogers RF, Gao GR, and Schwaber JS

American journal of physiology. Regulatory, integrative and comparative physiology 295(1):R15-27, 2008 Jul - Who cited this? | PubMed ID: 18434436 | Fulltext

Transcriptional regulatory network analysis during epithelial-mesenchymal transformation of retinal pigment epithelium.

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Pratt CH, Vadigepalli R, Chakravarthula P, Gonye GE, Philp NJ, and Grunwald GB

Molecular vision 14:1414, 2008 - Who cited this? | PubMed ID: 18682805 | Fulltext

Bladder inflammatory transcriptome in response to tachykinins: neurokinin 1 receptor-dependent genes and transcription regulatory elements.

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Saban R, Simpson C, Vadigepalli R, Memet S, Dozmorov I, and Saban MR

BMC urology 7:7, 2007 - Who cited this? | PubMed ID: 17519035 | Fulltext

From promoter analysis to transcriptional regulatory network prediction using PAINT.

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Gonye GE, Chakravarthula P, Schwaber JS, and Vadigepalli R

Methods in molecular biology (Clifton, N.J.) 408:49-68, 2007 - Who cited this? | PubMed ID: 18314577 | Fulltext

Transcriptional regulatory network analysis of developing human erythroid progenitors reveals patterns of coregulation and potential transcriptional regulators.

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Keller MA, Addya S, Vadigepalli R, Banini B, Delgrosso K, Huang H, and Surrey S

Physiological genomics 28(1):114, 2006 Dec 13 - Who cited this? | PubMed ID: 16940433 | Fulltext

Epidermal growth factor receptor-induced circadian-time-dependent gene regulation in suprachiasmatic nucleus.

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Vadigepalli R, Hao H, Miller GM, Liu H, and Schwaber JS

Neuroreport 17(13):1437-41, 2006 Sep 18 - Who cited this? | PubMed ID: 16932154 | Fulltext

Systems analysis of circadian time-dependent neuronal epidermal growth factor receptor signaling.

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Zak DE, Hao H, Vadigepalli R, Miller GM, Ogunnaike BA, and Schwaber JS

Genome biology 7(6):R48, 2006 - Who cited this? | PubMed ID: 16784547 | Fulltext

The inflammatory and normal transcriptome of mouse bladder detrusor and mucosa.

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Saban MR, Hellmich HL, Turner M, Nguyen NB, Vadigepalli R, Dyer DW, Hurst RE, Centola M, and Saban R

BMC physiology 6:1, 2006 - Who cited this? | PubMed ID: 16420690 | Fulltext

Chronic alcohol exposure alters transcription broadly in a key integrative brain nucleus for homeostasis: the nucleus tractus solitarius.

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Covarrubias MY, Khan RL, Vadigepalli R, Hoek JB, and Schwaber JS

Physiological genomics 24(1):45, 2005 Dec 14 - Who cited this? | PubMed ID: 16189278 | Fulltext

Erythroid-induced commitment of K562 cells results in clusters of differentially expressed genes enriched for specific transcription regulatory elements.

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Addya S, Keller MA, Delgrosso K, Ponte CM, Vadigepalli R, Gonye GE, and Surrey S

Physiological genomics 19(1):117, 2004 Sep 16 - Who cited this? | PubMed ID: 15252187 | Fulltext

PAINT: a promoter analysis and interaction network generation tool for gene regulatory network identification.

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Vadigepalli R, Chakravarthula P, Zak DE, Schwaber JS, and Gonye GE

Omics : a journal of integrative biology 7(3):235-52, 2003 - Who cited this? | PubMed ID: 14583114 | Fulltext

Continuous-time identification of gene expression models.

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Zak DE, Pearson RK, Vadigepalli R, Gonye GE, Schwaber JS, and Doyle FJ

Omics : a journal of integrative biology 7(4):373-86, 2003 - Who cited this? | PubMed ID: 14683610 | Fulltext

Analysis and neuronal modeling of the nonlinear characteristics of a local cardiac reflex in the rat.

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Vadigepalli R, Doyle FJ, and Schwaber JS

Neural computation 13(10):2239-71, 2001 Oct - Who cited this? | PubMed ID: 11570998 | Fulltext

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