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Papers authored by Stroud RM

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Comparison of human solute carriers.

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Schlessinger A, Matsson P, Shima JE, Pieper U, Yee SW, Kelly L, Apeltsin L, Stroud RM, Ferrin TE, Giacomini KM, and Sali A

Protein science : a publication of the Protein Society 19(3):412-28, 2010 Mar - Who cited this? | PubMed ID: 20052679 | Fulltext

A survey of integral alpha-helical membrane proteins.

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Kelly L, Pieper U, Eswar N, Hays FA, Li M, Roe-Zurz Z, Kroetz DL, Giacomini KM, Stroud RM, and Sali A

Journal of structural and functional genomics 10(4):269-80, 2009 Dec - Who cited this? | PubMed ID: 19760129 | Fulltext

Catalytically-active complex of HIV-1 integrase with a viral DNA substrate binds anti-integrase drugs.

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Alian A, Griner SL, Chiang V, Tsiang M, Jones G, Birkus G, Geleziunas R, Leavitt AD, and Stroud RM

Proceedings of the National Academy of Sciences of the United States of America 106(20):8192-7, 2009 May 19 - Who cited this? | PubMed ID: 19416821 | Fulltext

Crystal Structure of an RluF-RNA Complex: A Base-Pair Rearrangement Is the Key to Selectivity of RluF for U2604 of the Ribosome.

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Alian A, Degiovanni A, Griner SL, Finer-Moore JS, and Stroud RM

Journal of molecular biology 388(4):785-800, 2009 May 15 - Who cited this? | PubMed ID: 19298824 | Fulltext

Crystal structure of human aquaporin 4 at 1.8 A and its mechanism of conductance.

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Ho JD, Yeh R, Sandstrom A, Chorny I, Harries WE, Robbins RA, Miercke LJ, and Stroud RM

Proceedings of the National Academy of Sciences of the United States of America 106(18):7437-42, 2009 May 5 - Who cited this? | PubMed ID: 19383790 | Fulltext

2007 Annual progress report synopsis of the Center for Structures of Membrane Proteins.

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Stroud RM, Choe S, Holton J, Kaback HR, Kwiatkowski W, Minor DL, Riek R, Sali A, Stahlberg H, and Harries W

Journal of structural and functional genomics 10(2):193-208, 2009 Apr - Who cited this? | PubMed ID: 19148774 | Fulltext

Ratiocinative screen of eukaryotic integral membrane protein expression and solubilization for structure determination.

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Hays FA, Roe-Zurz Z, Li M, Kelly L, Gruswitz F, Sali A, and Stroud RM

Journal of structural and functional genomics 10(1):9-16, 2009 Mar - Who cited this? | PubMed ID: 19031011 | Fulltext

The unfolded protein response signals through high-order assembly of Ire1.

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Korennykh AV, Egea PF, Korostelev AA, Finer-Moore J, Zhang C, Shokat KM, Stroud RM, and Walter P

Nature 457(7230):687-93, 2009 Feb 5 - Who cited this? | PubMed ID: 19079236 | Fulltext

Selecting optimum eukaryotic integral membrane proteins for structure determination by rapid expression and solubilization screening.

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Li M, Hays FA, Roe-Zurz Z, Vuong L, Kelly L, Ho CM, Robbins RM, Pieper U, O'Connell JD, Miercke LJ, Giacomini KM, Sali A, and Stroud RM

Journal of molecular biology 385(3):820-30, 2009 Jan 23 - Who cited this? | PubMed ID: 19061901 | Fulltext

A general protocol for the crystallization of membrane proteins for X-ray structural investigation.

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Newby ZE, O'Connell JD, Gruswitz F, Hays FA, Harries WE, Harwood IM, Ho JD, Lee JK, Savage DF, Miercke LJ, and Stroud RM

Nature protocols 4(5):619-37, 2009 - Who cited this? | PubMed ID: 19360018 | Fulltext

Michael A. Raftery (1936-2007)--the first enzyme mechanism, sequential cooperativity, and the nicotinic acetylcholine receptor defined.

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Stroud RM

Protein science : a publication of the Protein Society 17(10):1864-6, 2008 Oct - Who cited this? | PubMed ID: 18819191 | Fulltext

Crystal structure of bovine mitochondrial factor B at 0.96-A resolution.

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Lee JK, Belogrudov GI, and Stroud RM

Proceedings of the National Academy of Sciences of the United States of America 105(36):13379, 2008 Sep 9 - Who cited this? | PubMed ID: 18768789 | Fulltext

Crystal structure of the aquaglyceroporin PfAQP from the malarial parasite Plasmodium falciparum.

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Newby ZE, O'Connell Iii J, Robles-Colmenares Y, Khademi S, Miercke LJ, and Stroud RM

Nature structural & molecular biology 15(6):619-25, 2008 Jun - Who cited this? | PubMed ID: 18500352 | Fulltext

Structure of a TrmA-RNA complex: A consensus RNA fold contributes to substrate selectivity and catalysis in m5U methyltransferases.

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Alian A, Lee TT, Griner SL, Stroud RM, and Finer-Moore J

Proceedings of the National Academy of Sciences of the United States of America, 2008 May 1 - Who cited this? | PubMed ID: 18451029 | Fulltext

Nickel ferrite aerogels with monodisperse nanoscale building blocks--the importance of processing temperature and atmosphere.

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Pettigrew KA, Long JW, Carpenter EE, Baker CC, Lytle JC, Chervin CN, Logan MS, Stroud RM, and Rolison DR

ACS nano 2(4):784-90, 2008 Apr - Who cited this? | PubMed ID: 19206611 | Fulltext

Structural and biochemical insights into the dicing mechanism of mouse Dicer: a conserved lysine is critical for dsRNA cleavage.

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Du Z, Lee JK, Tjhen R, Stroud RM, and James TL

Proceedings of the National Academy of Sciences of the United States of America 105(7):2391, 2008 Feb 19 - Who cited this? | PubMed ID: 18268334 | Fulltext

Structures of SRP54 and SRP19, the two proteins that organize the ribonucleic core of the signal recognition particle from Pyrococcus furiosus.

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Egea PF, Napetschnig J, Walter P, and Stroud RM

PLoS ONE 3(10):e3528, 2008 - Who cited this? | PubMed ID: 18953414 | Fulltext

Structures of the Signal Recognition Particle Receptor from the Archaeon Pyrococcus furiosus: Implications for the Targeting Step at the Membrane.

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Egea PF, Tsuruta H, de Leon GP, Napetschnig J, Walter P, and Stroud RM

PLoS ONE 3(11):e3619, 2008 - Who cited this? | PubMed ID: 18978942 | Fulltext

TARP auxiliary subunits switch AMPA receptor antagonists into partial agonists.

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Menuz K, Stroud RM, Nicoll RA, and Hays FA

Science (New York, N.Y.) 318(5851):815-7, 2007 Nov 2 - Who cited this? | PubMed ID: 17975069 | Fulltext

X-ray crystallographic and NMR studies of protein-protein and protein-nucleic acid interactions involving the KH domains from human poly(C)-binding protein-2.

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Du Z, Lee JK, Fenn S, Tjhen R, Stroud RM, and James TL

RNA (New York, N.Y.) 13(7):1043-51, 2007 Jul - Who cited this? | PubMed ID: 17526645 | Fulltext

Structural basis of aquaporin inhibition by mercury.

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Savage DF and Stroud RM

Journal of molecular biology 368(3):607-17, 2007 May 4 - Who cited this? | PubMed ID: 17376483 | Fulltext

Cell-free complements in vivo expression of the E. coli membrane proteome.

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Savage DF, Anderson CL, Robles-Colmenares Y, Newby ZE, and Stroud RM

Protein science : a publication of the Protein Society 16(5):966-76, 2007 May - Who cited this? | PubMed ID: 17456747 | Fulltext

How U38, 39, and 40 of many tRNAs become the targets for pseudouridylation by TruA.

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Hur S and Stroud RM

Molecular cell 26(2):189, 2007 Apr 27 - Who cited this? | PubMed ID: 17466622 | Fulltext

The crystal structure of E. coli rRNA pseudouridine synthase RluE.

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Pan H, Ho JD, Stroud RM, and Finer-Moore J

Journal of molecular biology 367(5):1459-70, 2007 Apr 13 - Who cited this? | PubMed ID: 17320904 | Fulltext

Incorporation of homogeneous, nanoscale MnO2 within ultraporous carbon structures via self-limiting electroless deposition: implications for electrochemical capacitors.

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Fischer AE, Pettigrew KA, Rolison DR, Stroud RM, and Long JW

Nano letters 7(2):281-6, 2007 Feb - Who cited this? | PubMed ID: 17297991 | Fulltext

Transmembrane transporters: an open and closed case.

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Stroud RM

Proceedings of the National Academy of Sciences of the United States of America 104(5):1445-6, 2007 Jan 30 - Who cited this? | PubMed ID: 17251354 | Fulltext

Inhibitory complex of the transmembrane ammonia channel, AmtB, and the cytosolic regulatory protein, GlnK, at 1.96 A.

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Gruswitz F, O'Connell J, and Stroud RM

Proceedings of the National Academy of Sciences of the United States of America 104(1):42, 2007 Jan 2 - Who cited this? | PubMed ID: 17190799 | Fulltext

Crystal structure of the third KH domain of human poly(C)-binding protein-2 in complex with a C-rich strand of human telomeric DNA at 1.6 A resolution.

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Fenn S, Du Z, Lee JK, Tjhen R, Stroud RM, and James TL

Nucleic acids research 35(8):2651-60, 2007 - Who cited this? | PubMed ID: 17426136 | Fulltext

X-ray structures of the signal recognition particle receptor reveal targeting cycle intermediates.

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Reyes CL, Rutenber E, Walter P, and Stroud RM

PLoS ONE 2(7):e607, 2007 - Who cited this? | PubMed ID: 17622352 | Fulltext

Substrate recognition by RNA 5-methyluridine methyltransferases and pseudouridine synthases: a structural perspective.

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Hur S, Stroud RM, and Finer-Moore J

The Journal of biological chemistry 281(51):38969-73, 2006 Dec 22 - Who cited this? | PubMed ID: 17085441 | Fulltext

Elemental compositions of comet 81P/Wild 2 samples collected by Stardust.

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Flynn GJ, Bleuet P, Borg J, Bradley JP, Brenker FE, Brennan S, Bridges J, Brownlee DE, Bullock ES, Burghammer M, Clark BC, Dai ZR, Daghlian CP, Djouadi Z, Fakra S, Ferroir T,

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Science (New York, N.Y.) 314(5806):1731, 2006 Dec 15 - Who cited this? | PubMed ID: 17170294 | Fulltext

The Amt/MEP/Rh family: structure of AmtB and the mechanism of ammonia gas conduction.

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Khademi S and Stroud RM

Physiology (Bethesda, Md.) 21:419-29, 2006 Dec - Who cited this? | PubMed ID: 17119155 | Fulltext

Triarylphosphine-stabilized platinum nanoparticles in three-dimensional nanostructured films as active electrocatalysts.

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Kostelansky CN, Pietron JJ, Chen MS, Dressick WJ, Swider-Lyons KE, Ramaker DE, Stroud RM, Klug CA, Zelakiewicz BS, and Schull TL

The journal of physical chemistry. B 110(43):21487-96, 2006 Nov 2 - Who cited this? | PubMed ID: 17064099 | Fulltext

The role of protein dynamics in thymidylate synthase catalysis: variants of conserved 2'-deoxyuridine 5'-monophosphate (dUMP)-binding Tyr-261.

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Newby Z, Lee TT, Morse RJ, Liu Y, Liu L, Venkatraman P, Santi DV, Finer-Moore JS, and Stroud RM

Biochemistry 45(24):7415-28, 2006 Jun 20 - Who cited this? | PubMed ID: 16768437 | Fulltext

Determination of interface atomic structure and its impact on spin transport using Z-contrast microscopy and density-functional theory.

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Zega TJ, Hanbicki AT, Erwin SC, Zutić I, Kioseoglou G, Li CH, Jonker BT, and Stroud RM

Physical review letters 96(19):196101, 2006 May 19 - Who cited this? | PubMed ID: 16803113 | Fulltext

The structure of a ketoreductase determines the organization of the beta-carbon processing enzymes of modular polyketide synthases.

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Keatinge-Clay AT and Stroud RM

Structure (London, England : 1993) 14(4):737, 2006 Apr - Who cited this? | PubMed ID: 16564177 | Fulltext

Structural basis for conductance by the archaeal aquaporin AqpM at 1.68 A.

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Lee JK, Kozono D, Remis J, Kitagawa Y, Agre P, and Stroud RM

Proceedings of the National Academy of Sciences of the United States of America 102(52):18932-7, 2005 Dec 27 - Who cited this? | PubMed ID: 16361443 | Fulltext

On the mechanism of sensing unfolded protein in the endoplasmic reticulum.

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Credle JJ, Finer-Moore JS, Papa FR, Stroud RM, and Walter P

Proceedings of the National Academy of Sciences of the United States of America 102(52):18773-84, 2005 Dec 27 - Who cited this? | PubMed ID: 16365312 | Fulltext

Crystal structure of the first KH domain of human poly(C)-binding protein-2 in complex with a C-rich strand of human telomeric DNA at 1.7 A.

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Du Z, Lee JK, Tjhen R, Li S, Pan H, Stroud RM, and James TL

The Journal of biological chemistry 280(46):38823-30, 2005 Nov 18 - Who cited this? | PubMed ID: 16186123 | Fulltext

The structure of Cryptococcus neoformans thymidylate synthase suggests strategies for using target dynamics for species-specific inhibition.

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Finer-Moore JS, Anderson AC, O'Neil RH, Costi MP, Ferrari S, Krucinski J, and Stroud RM

Acta crystallographica. Section D, Biological crystallography 61(Pt 10):1320-34, 2005 Oct - Who cited this? | PubMed ID: 16204883 | Fulltext

Targeting proteins to membranes: structure of the signal recognition particle.

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Egea PF, Stroud RM, and Walter P

Current opinion in structural biology 15(2):213-20, 2005 Apr - Who cited this? | PubMed ID: 15837181 | Fulltext

A unique RNA Fold in the RumA-RNA-cofactor ternary complex contributes to substrate selectivity and enzymatic function.

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Lee TT, Agarwalla S, and Stroud RM

Cell 120(5):599, 2005 Mar 11 - Who cited this? | PubMed ID: 15766524 | Fulltext

De novo design of an IL-4 antagonist and its structure at 1.9 A.

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Laporte SL, Forsyth CM, Cunningham BC, Miercke LJ, Akhavan D, and Stroud RM

Proceedings of the National Academy of Sciences of the United States of America 102(6):1889-94, 2005 Feb 8 - Who cited this? | PubMed ID: 15684085 | Fulltext

Nanocrystalline iron oxide aerogels as mesoporous magnetic architectures.

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Long JW, Logan MS, Rhodes CP, Carpenter EE, Stroud RM, and Rolison DR

Journal of the American Chemical Society 126(51):16879-89, 2004 Dec 29 - Who cited this? | PubMed ID: 15612727 | Fulltext

Unraveling the interface of signal recognition particle and its receptor by using chemical cross-linking and tandem mass spectrometry.

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Chu F, Shan SO, Moustakas DT, Alber F, Egea PF, Stroud RM, Walter P, and Burlingame AL

Proceedings of the National Academy of Sciences of the United States of America 101(47):16454-9, 2004 Nov 23 - Who cited this? | PubMed ID: 15546976 | Fulltext

Silver-colloid-nucleated cytochrome c superstructures encapsulated in silica nanoarchitectures.

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Wallace JM, Dening BM, Eden KB, Stroud RM, Long JW, and Rolison DR

Langmuir : the ACS journal of surfaces and colloids 20(21):9276-81, 2004 Oct 12 - Who cited this? | PubMed ID: 15461518 | Fulltext

Mechanism of association and reciprocal activation of two GTPases.

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Shan SO, Stroud RM, and Walter P

PLoS biology 2(10):e320, 2004 Oct - Who cited this? | PubMed ID: 15383838 | Fulltext

The channel architecture of aquaporin 0 at a 2.2-A resolution.

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Harries WE, Akhavan D, Miercke LJ, Khademi S, and Stroud RM

Proceedings of the National Academy of Sciences of the United States of America 101(39):14045-50, 2004 Sep 28 - Who cited this? | PubMed ID: 15377788 | Fulltext

Mechanism of ammonia transport by Amt/MEP/Rh: structure of AmtB at 1.35 A.

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Khademi S, O'Connell J, Remis J, Robles-Colmenares Y, Miercke LJ, and Stroud RM

Science (New York, N.Y.) 305(5690):1587-94, 2004 Sep 10 - Who cited this? | PubMed ID: 15361618 | Fulltext

Polymorphism in presolar Al2O3 grains from asymptotic giant branch stars.

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Stroud RM, Nittler LR, and Alexander CM

Science (New York, N.Y.) 305(5689):1455-7, 2004 Sep 3 - Who cited this? | PubMed ID: 15353800 | Fulltext

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