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Papers authored by Stephens R

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Increased spontaneous apoptosis, but not survivin expression, is associated with histomorphologic response to neoadjuvant chemoradiation in rectal cancer.

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McDowell DT, Smith FM, Reynolds JV, Maher SG, Adida C, Crotty P, Gaffney EF, Hollywood D, Mehigan B, Stephens RB, and Kennedy MJ

International journal of colorectal disease 24(11):1261-9, 2009 Nov - Who cited this? | PubMed ID: 19593573 | Fulltext

Downregulated MicroRNA-200a in Meningiomas Promotes Tumor Growth by Reducing E-Cadherin and Activating the Wnt/{beta}-Catenin Signaling Pathway.

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Saydam O, Shen Y, Würdinger T, Senol O, Boke E, James MF, Tannous BA, Stemmer-Rachamimov AO, Yi M, Stephens RM, Fraefel C, Gusella JF, Krichevsky AM, and Breakefield XO

Molecular and cellular biology 29(21):5923-40, 2009 Nov - Who cited this? | PubMed ID: 19703993 | Fulltext

Trends in characteristics of children served by the Children's Mental Health Initiative: 1994-2007.

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Walrath C, Garraza LG, Stephens R, Azur M, Miech R, and Leaf P

Administration and policy in mental health 36(6):361-73, 2009 Nov - Who cited this? | PubMed ID: 19641987 | Fulltext

Characterization of the preformed plasma for high-intensity laser-plasma interaction.

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Le Pape S, Tsui YY, Macphee A, Hey D, Patel P, Mackinnon A, Key M, Wei M, Ma T, Beg FN, Stephens R, Akli K, Link T, Van-Woerkom L, and Freeman RR

Optics letters 34(19):2997-9, 2009 Oct 1 - Who cited this? | PubMed ID: 19794794 | Fulltext

Effect of reentrant cone geometry on energy transport in intense laser-plasma interactions.

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Lancaster KL, Sherlock M, Green JS, Gregory CD, Hakel P, Akli KU, Beg FN, Chen SN, Freeman RR, Habara H, Heathcote R, Hey DS, Highbarger K, Key MH, Kodama R, Krushelnick K,

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Physical review. E, Statistical, nonlinear, and soft matter physics 80(4 Pt 2):045401, 2009 Oct - Who cited this? | PubMed ID: 19905383 | Fulltext

Extracting biological meaning from large gene lists with DAVID.

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Huang da W, Sherman BT, Zheng X, Yang J, Imamichi T, Stephens R, and Lempicki RA

Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.] Chapter 13:Unit 13.11, 2009 Sep - Who cited this? | PubMed ID: 19728287 | Fulltext

How to insert a central line.

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Rajan J, Bajaj S, Kaur N, and Stephens RC

British journal of hospital medicine (London, England : 2005) 70(9):M142-3, 2009 Sep - Who cited this? | PubMed ID: 19749634 | Fulltext

Swearing as a response to pain.

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Stephens R, Atkins J, and Kingston A

Neuroreport 20(12):1056-60, 2009 Aug 5 - Who cited this? | PubMed ID: 19590391 | Fulltext

A dual-channel, curved-crystal spectrograph for petawatt laser, x-ray backlighter source studies.

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Theobald W, Stoeckl C, Jaanimagi PA, Nilson PM, Storm M, Meyerhofer DD, Sangster TC, Hey D, MacKinnon AJ, Park HS, Patel PK, Shepherd R, Snavely RA, Key MH, King JA, Zhang B,

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The Review of scientific instruments 80(8):083501, 2009 Aug - Who cited this? | PubMed ID: 19725649 | Fulltext

The third dimension of ELISPOTs: Quantifying antibody secretion from individual plasma cells.

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Bromage E, Stephens R, and Hassoun L

Journal of immunological methods 346(1-2):75-9, 2009 Jul 31 - Who cited this? | PubMed ID: 19465022 | Fulltext

Brief Motivational Intervention to Reduce HIV Risk and to Increase HIV Testing Among Offenders Under Community Supervision.

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Alemagno SA, Stephens RC, Stephens P, Shaffer-King P, and White P

Journal of correctional health care 15(3):210-21, 2009 Jul - Who cited this? | PubMed ID: 19477803 | Fulltext

Gene expression profiling of substantia nigra dopamine neurons: further insights into Parkinson's disease pathology.

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Simunovic F, Yi M, Wang Y, Macey L, Brown LT, Krichevsky AM, Andersen SL, Stephens RM, Benes FM, and Sonntag KC

Brain : a journal of neurology 132(Pt 7):1795-809, 2009 Jul - Who cited this? | PubMed ID: 19052140 | Fulltext

IC50-to-Ki: a web-based tool for converting IC50 to Ki values for inhibitors of enzyme activity and ligand binding.

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Cer RZ, Mudunuri U, Stephens R, and Lebeda FJ

Nucleic acids research 37(Web Server issue):W441-5, 2009 Jul 1 - Who cited this? | PubMed ID: 19395593 | Fulltext

The Adolescent Substance Abuse Prevention Study: A randomized field trial of a universal substance abuse prevention program.

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Sloboda Z, Stephens RC, Stephens PC, Grey SF, Teasdale B, Hawthorne RD, Williams J, and Marquette JF

Drug and alcohol dependence 102(1-3):1-10, 2009 Jun 1 - Who cited this? | PubMed ID: 19332365 | Fulltext

The influence of program mediators on eleventh grade outcomes for seventh grade substance users and nonusers.

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Teasdale B, Stephens PC, Sloboda Z, Grey SF, and Stephens RC

Drug and alcohol dependence 102(1-3):11-8, 2009 Jun 1 - Who cited this? | PubMed ID: 19345519 | Fulltext

Universal school-based substance abuse prevention programs: Modeling targeted mediators and outcomes for adolescent cigarette, alcohol and marijuana use.

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Stephens PC, Sloboda Z, Stephens RC, Teasdale B, Grey SF, Hawthorne RD, and Williams J

Drug and alcohol dependence 102(1-3):19-29, 2009 Jun 1 - Who cited this? | PubMed ID: 19362433 | Fulltext

Implementation fidelity: the experience of the Adolescent Substance Abuse Prevention Study.

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Sloboda Z, Stephens P, Pyakuryal A, Teasdale B, Stephens RC, Hawthorne RD, Marquette J, and Williams JE

Health education research 24(3):394-406, 2009 Jun - Who cited this? | PubMed ID: 18567611 | Fulltext

Large-scale genotyping and genetic mapping in Plasmodium parasites.

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Su XZ, Jiang H, Yi M, Mu J, and Stephens RM

The Korean journal of parasitology 47(2):83-91, 2009 Jun - Who cited this? | PubMed ID: 19488413 | Fulltext

Why are some Parkinson disease patients unaware of their dyskinesias?.

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Jenkinson PM, Edelstyn NM, Stephens R, and Ellis SJ

Cognitive and behavioral neurology : official journal of the Society for Behavioral and Cognitive Neurology 22(2):117-21, 2009 Jun - Who cited this? | PubMed ID: 19506428 | Fulltext

The kinetic enhancement of hydrogen cycling in NaAlH(4) by melt infusion into nanoporous carbon aerogel.

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Stephens RD, Gross AF, Van Atta SL, Vajo JJ, and Pinkerton FE

Nanotechnology 20(20):204018, 2009 May 20 - Who cited this? | PubMed ID: 19420666 | Fulltext

Murine Leukemias with Retroviral Insertions at Lmo2 Are Predictive of the Leukemias Induced in SCID-X1 Patients Following Retroviral Gene Therapy.

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Davé UP, Akagi K, Tripathi R, Cleveland SM, Thompson MA, Yi M, Stephens R, Downing JR, Jenkins NA, and Copeland NG

PLoS genetics 5(5):e1000491, 2009 May - Who cited this? | PubMed ID: 19440365 | Fulltext

Murine leukemias with retroviral insertions at Lmo2 are predictive of the leukemias induced in SCID-X1 patients following retroviral gene therapy.

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Davé UP, Akagi K, Tripathi R, Cleveland SM, Thompson MA, Yi M, Stephens R, Downing JR, Jenkins NA, and Copeland NG

PLoS genetics 5(5):e1000491, 2009 May - Who cited this? | PubMed ID: 19461887 | Fulltext

Pooled safety and efficacy analysis examining the effect of performance status on outcomes in nine first-line treatment trials using individual data from patients with metastatic colorectal cancer.

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Sargent DJ, Köhne CH, Sanoff HK, Bot BM, Seymour MT, de Gramont A, Porschen R, Saltz LB, Rougier P, Tournigand C, Douillard JY, Stephens RJ, Grothey A, and Goldberg RM

Journal of clinical oncology : official journal of the American Society of Clinical Oncology 27(12):1948-55, 2009 Apr 20 - Who cited this? | PubMed ID: 19255311 | Fulltext

Attachment and entry of Chlamydia have distinct requirements for host protein disulfide isomerase.

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Abromaitis S and Stephens RS

PLoS pathogens 5(4):e1000357, 2009 Apr - Who cited this? | PubMed ID: 19343202 | Fulltext

Preoperative radiotherapy versus selective postoperative chemoradiotherapy in patients with rectal cancer (MRC CR07 and NCIC-CTG C016): a multicentre, randomised trial.

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Sebag-Montefiore D, Stephens RJ, Steele R, Monson J, Grieve R, Khanna S, Quirke P, Couture J, de Metz C, Myint AS, Bessell E, Griffiths G, Thompson LC, and Parmar M

Lancet 373(9666):811-20, 2009 Mar 7 - Who cited this? | PubMed ID: 19269519 | Fulltext

Effect of the plane of surgery achieved on local recurrence in patients with operable rectal cancer: a prospective study using data from the MRC CR07 and NCIC-CTG CO16 randomised clinical trial.

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Quirke P, Steele R, Monson J, Grieve R, Khanna S, Couture J, O'Callaghan C, Myint AS, Bessell E, Thompson LC, Parmar M, Stephens RJ, Sebag-Montefiore D, MRC CR07/NCIC-CTG CO16 Trial Investigators, and NCRI Colorectal Cancer Study Group

Lancet 373(9666):821-8, 2009 Mar 7 - Who cited this? | PubMed ID: 19269520 | Fulltext

The role of long-term memory in digit-symbol test performance in young and older adults.

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Stephens R and Kaufman A

Neuropsychology, development, and cognition. Section B, Aging, neuropsychology and cognition 16(2):219-40, 2009 Mar - Who cited this? | PubMed ID: 19125358 | Fulltext

Divergence without difference: phylogenetics and taxonomy of Chlamydia resolved.

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Stephens RS, Myers G, Eppinger M, and Bavoil PM

FEMS immunology and medical microbiology 55(2):115-9, 2009 Mar - Who cited this? | PubMed ID: 19281563 | Fulltext

Chlamydia pneumoniae encodes a functional aromatic amino acid hydroxylase.

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Abromaitis S, Hefty PS, and Stephens RS

FEMS immunology and medical microbiology 55(2):196-205, 2009 Mar - Who cited this? | PubMed ID: 19141112 | Fulltext

bioDBnet: the biological database network.

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Mudunuri U, Che A, Yi M, and Stephens RM

Bioinformatics (Oxford, England) 25(4):555-6, 2009 Feb 15 - Who cited this? | PubMed ID: 19129209 | Fulltext

Decreased heart rate variability in patients with cirrhosis relates to the presence and degree of hepatic encephalopathy.

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Mani AR, Montagnese S, Jackson CD, Jenkins CW, Head IM, Stephens RC, Moore KP, and Morgan MY

American journal of physiology. Gastrointestinal and liver physiology 296(2):G330-8, 2009 Feb - Who cited this? | PubMed ID: 19023029 | Fulltext

Hot-electron temperature and laser-light absorption in fast ignition.

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Haines MG, Wei MS, Beg FN, and Stephens RB

Physical review letters 102(4):045008, 2009 Jan 30 - Who cited this? | PubMed ID: 19257435 | Fulltext

Intermittent therapy in the palliative treatment of metastatic colorectal cancer.

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Wadhawan A, Stephens R, and Adams R

Expert review of anticancer therapy 9(1):125-34, 2009 Jan - Who cited this? | PubMed ID: 19105712 | Fulltext

Germinal centre and marginal zone B cells expand quickly in a second Plasmodium chabaudi malaria infection producing mature plasma cells.

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Stephens R, Ndungu FM, and Langhorne J

Parasite immunology 31(1):20-31, 2009 Jan - Who cited this? | PubMed ID: 19121080 | Fulltext

Increased glial glutamate transporter EAAT2 expression reduces visceral nociceptive response in mice.

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Lin Y, Tian G, Roman K, Handy C, Travers JB, Lin CL, and Stephens RL

American journal of physiology. Gastrointestinal and liver physiology 296(1):G129-34, 2009 Jan - Who cited this? | PubMed ID: 19023027 | Fulltext

Differences in the Tumor Microenvironment between African-American and European-American Breast Cancer Patients.

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Martin DN, Boersma BJ, Yi M, Reimers M, Howe TM, Yfantis HG, Tsai YC, Williams EH, Lee DH, Stephens RM, Weissman AM, and Ambs S

PLoS ONE 4(2):e4531, 2009 - Who cited this? | PubMed ID: 19225562 | Fulltext

Genome and gene alterations by insertions and deletions in the evolution of human and chimpanzee chromosome 22.

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Volfovsky N, Oleksyk TK, Cruz KC, Truelove AL, Stephens RM, and Smith MW

BMC genomics 10:51, 2009 - Who cited this? | PubMed ID: 19171065 | Fulltext

Label-free Global Serum Proteomic Profiling Reveals Novel Celecoxib-modulated Proteins in Familial Adenomatous Polyposis Patients.

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Fatima N, Chelius D, Luke BT, Yi M, Zhang T, Stauffer S, Stephens R, Lynch P, Miller K, Guszczynski T, Boring D, Greenwald P, and Ali IU

Cancer genomics & proteomics 6(1):41-9, 2009 - Who cited this? | PubMed ID: 19451089 | Fulltext

Seeking unique and common biological themes in multiple gene lists or datasets: pathway pattern extraction pipeline for pathway-level comparative analysis.

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Yi M, Mudunuri U, Che A, and Stephens RM

BMC bioinformatics 10:200, 2009 - Who cited this? | PubMed ID: 19563622 | Fulltext

RT-SHIV subpopulation dynamics in infected macaques during anti-HIV therapy.

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Shao W, Kearney M, Maldarelli F, Mellors JW, Stephens RM, Lifson JD, KewalRamani VN, Ambrose Z, Coffin JM, and Palmer SE

Retrovirology 6:101, 2009 - Who cited this? | PubMed ID: 19889213 | Fulltext

Reports of substance abuse prevention programming available in schools.

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Sloboda Z, Pyakuryal A, Stephens PC, Teasdale B, Forrest D, Stephens RC, and Grey SF

Prevention science : the official journal of the Society for Prevention Research 9(4):276-87, 2008 Dec - Who cited this? | PubMed ID: 18712481 | Fulltext

Editorial comment.

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Stephens R

The Journal of urology 180(6):2413-4, 2008 Dec - Who cited this? | PubMed ID: 18930269 | Fulltext

Chlamydial effector proteins localized to the host cell cytoplasmic compartment.

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Kleba B and Stephens RS

Infection and immunity 76(11):4842-50, 2008 Nov - Who cited this? | PubMed ID: 18710866 | Fulltext

Altered gene expression profiles define pathways in colorectal cancer cell lines affected by celecoxib.

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Fatima N, Yi M, Ajaz S, Stephens RM, Stauffer S, Greenwald P, Munroe DJ, and Ali IU

Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology 17(11):3051-61, 2008 Nov - Who cited this? | PubMed ID: 18957522 | Fulltext

Influence of a patient decision aid on decisional conflict related to PSA testing: A structural equation model.

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Stephens RL, Xu Y, Volk RJ, Scholl LE, Kamin SL, Holden EW, and Stroud LA

Health psychology : official journal of the Division of Health Psychology, American Psychological Association 27(6):711-21, 2008 Nov - Who cited this? | PubMed ID: 19025266 | Fulltext

GEOmetadb: powerful alternative search engine for the Gene Expression Omnibus (GEO).

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Zhu Y, Davis S, Stephens R, Meltzer PS, and Chen Y

Bioinformatics (Oxford, England), 2008 Oct 7 - Who cited this? | PubMed ID: 18842599 | Fulltext

Characteristics, service experiences, and outcomes of transition-aged youth in systems of care: programmatic and policy implications.

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Manteuffel B, Stephens RL, Sondheimer DL, and Fisher SK

The journal of behavioral health services & research 35(4):469-87, 2008 Oct - Who cited this? | PubMed ID: 18618264 | Fulltext

Density measurement of shock compressed foam using two-dimensional x-ray radiography.

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Le Pape S, Macphee A, Hey D, Patel P, Mackinnon A, Key M, Pasley J, Wei M, Chen S, Ma T, Beg F, Alexander N, Stephens R, Offerman D, Link A, Van-Woerkom L,

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The Review of scientific instruments 79(10):106104, 2008 Oct - Who cited this? | PubMed ID: 19044748 | Fulltext

A Bremsstrahlung spectrometer using k-edge and differential filters with image plate dosimeters.

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Chen CD, King JA, Key MH, Akli KU, Beg FN, Chen H, Freeman RR, Link A, Mackinnon AJ, MacPhee AG, Patel PK, Porkolab M, Stephens RB, and Van Woerkom LD

The Review of scientific instruments 79(10):10E305, 2008 Oct - Who cited this? | PubMed ID: 19044467 | Fulltext

Electron heated target temperature measurements in petawatt laser experiments based on extreme ultraviolet imaging and spectroscopy.

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Ma T, Beg FN, MacPhee AG, Chung HK, Key MH, Mackinnon AJ, Patel PK, Hatchett S, Akli KU, Stephens RB, Chen CD, Freeman RR, Link A, Offermann DT, Ovchinnikov V, and Van Woerkom LD

The Review of scientific instruments 79(10):10E312, 2008 Oct - Who cited this? | PubMed ID: 19044474 | Fulltext

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