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Papers authored by Shih A

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The glial cell response is an essential component of hypoxia-induced erythropoiesis in mice.

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Weidemann A, Kerdiles YM, Knaup KX, Rafie CA, Boutin AT, Stockmann C, Takeda N, Scadeng M, Shih AY, Haase VH, Simon MC, Kleinfeld D, and Johnson RS

The Journal of clinical investigation 119(11):3373-83, 2009 Nov - Who cited this? | PubMed ID: 19809162 | Fulltext

Maturation of high-density lipoproteins.

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Shih AY, Sligar SG, and Schulten K

Journal of the Royal Society, Interface / the Royal Society 6(39):863-71, 2009 Oct 6 - Who cited this? | PubMed ID: 19570799 | Fulltext

Determination of cardiac output in neonatal foals by ultrasound velocity dilution and its comparison to the lithium dilution method.

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Shih A, Giguère S, Sanchez LC, Valverde A, Bandt C, Jankunas H, and Robertson S

Journal of veterinary emergency and critical care (San Antonio, Tex. 19(5):438-43, 2009 Oct - Who cited this? | PubMed ID: 19821884 | Fulltext

Finite element model development of a child pelvis with optimization-based material identification.

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Kim JE, Li Z, Ito Y, Huber CD, Shih AM, Eberhardt AW, Yang KH, King AI, and Soni BK

Journal of biomechanics 42(13):2191-5, 2009 Sep 18 - Who cited this? | PubMed ID: 19646702 | Fulltext

GR-Aligner: an algorithm for aligning pairwise genomic sequences containing rearrangement events.

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Chu TC, Liu T, Lee DT, Lee GC, and Shih AC

Bioinformatics (Oxford, England) 25(17):2188-93, 2009 Sep 1 - Who cited this? | PubMed ID: 19542149 | Fulltext

Autism Speaks Global Autism Public Health Initiative: Bridging gaps in autism awareness, research, and services around the world.

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Shih A, Rosanoff M, Wallace S, and Dawson G

Beijing da xue xue bao. Yi xue ban = Journal of Peking University. Health sciences 41(4):389-91, 2009 Aug 18 - Who cited this? | PubMed ID: 19845067 | Fulltext

Microbial contaminations of laboratory mice and rats in taiwan from 2004 to 2007.

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Liang CT, Shih A, Chang YH, Liu CW, Lee YT, Hsieh WC, Huang YL, Huang WT, Kuang CH, Lee KH, Zhuo YX, Ho SY, Liao SL, Chiu YY, Hsu CN, Liang SC,

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Journal of the American Association for Laboratory Animal Science : JAALAS 48(4):381-6, 2009 Jul - Who cited this? | PubMed ID: 19653946 | Fulltext

Acute vascular disruption and aquaporin 4 loss after stroke.

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Friedman B, Schachtrup C, Tsai PS, Shih AY, Akassoglou K, Kleinfeld D, and Lyden PD

Stroke; a journal of cerebral circulation 40(6):2182-90, 2009 Jun - Who cited this? | PubMed ID: 19372455 | Fulltext

Intracardiac foreign body in a dog.

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Sereda NC, Towl S, Maisenbacher HW, Bleweis MS, Levy JK, Byrne BJ, Ellison GW, Shih A, Coomer AR, and Estrada AH

Journal of veterinary cardiology : the official journal of the European Society of Veterinary Cardiology 11(1):53-8, 2009 Jun - Who cited this? | PubMed ID: 19423415 | Fulltext

Effect of routine cardiovascular catheterization on cardiac troponin I concentration in dogs.

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Shih AC, Maisenbacher HW, Barreirinha A, Adin DB, Schmidt MK, Prosek R, and Estrada AH

Journal of veterinary cardiology : the official journal of the European Society of Veterinary Cardiology 11 Suppl 1:S87-92, 2009 May - Who cited this? | PubMed ID: 19395332 | Fulltext

GS2 as a retinol transacylase and as a catalytic dyad independent regulator of retinylester accretion.

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Gao JG, Shih A, Gruber R, Schmuth M, and Simon M

Molecular genetics and metabolism 96(4):253-60, 2009 Apr - Who cited this? | PubMed ID: 19181555 | Fulltext

Evaluation of the effects of transvenous pacing site on left ventricular function and synchrony in healthy anesthetized dogs.

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Maisenbacher HW, Estrada AH, Prosek R, Shih AC, and Vangilder JM

American journal of veterinary research 70(4):455-63, 2009 Apr - Who cited this? | PubMed ID: 19335100 | Fulltext

Active dilation of penetrating arterioles restores red blood cell flux to penumbral neocortex after focal stroke.

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Shih AY, Friedman B, Drew PJ, Tsai PS, Lyden PD, and Kleinfeld D

Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism 29(4):738-51, 2009 Apr - Who cited this? | PubMed ID: 19174826 | Fulltext

Determination of cardiac output in anesthetized neonatal foals by use of two pulse wave analysis methods.

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Shih AC, Giguère S, Sanchez LC, Valverde A, Jankunas HJ, and Robertson SA

American journal of veterinary research 70(3):334-9, 2009 Mar - Who cited this? | PubMed ID: 19254144 | Fulltext

Learning atomic human actions using variable-length markov models.

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Liang YM, Shih SW, Shih AC, Liao HY, and Lin CC

IEEE transactions on systems, man, and cybernetics. Part B, Cybernetics : a publication of the IEEE Systems, Man, and Cybernetics Society 39(1):268-80, 2009 Feb - Who cited this? | PubMed ID: 19068434 | Fulltext

Androgen-induced human breast cancer cell proliferation is mediated by discrete mechanisms in estrogen receptor-alpha-positive and -negative breast cancer cells.

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Lin HY, Sun M, Lin C, Tang HY, London D, Shih A, Davis FB, and Davis PJ

The Journal of steroid biochemistry and molecular biology 113(3-5):182-8, 2009 Feb - Who cited this? | PubMed ID: 19159686 | Fulltext

Resveratrol and 4-hydroxynonenal act in concert to increase glutamate cysteine ligase expression and glutathione in human bronchial epithelial cells.

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Zhang H, Shih A, Rinna A, and Forman HJ

Archives of biochemistry and biophysics 481(1):110-5, 2009 Jan 1 - Who cited this? | PubMed ID: 18983812 | Fulltext

Using medicare payment policy to transform the health system: a framework for improving performance.

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Guterman S, Davis K, Schoenbaum S, and Shih A

Health affairs (Project Hope) 28(2):w238-50, 2009 - Who cited this? | PubMed ID: 19174386 | Fulltext

A novel technique for demonstrating the real-time subsurface tissue thermal profile of two energized surgical instruments.

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Dodde R, Shih A, and Advincula AP

Journal of minimally invasive gynecology 16(5):599-603, 2009 - Who cited this? | PubMed ID: 19577964 | Fulltext

Molecular systems biology of ErbB1 signaling: bridging the gap through multiscale modeling and high-performance computing.

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Shih AJ, Purvis J, and Radhakrishnan R

Molecular bioSystems 4(12):1151-9, 2008 Dec - Who cited this? | PubMed ID: 19396377 | Fulltext

Prediction of human miRNAs using tissue-selective motifs in 3' UTRs.

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Chang YM, Juan HF, Lee TY, Chang YY, Yeh YM, Li WH, and Shih AC

Proceedings of the National Academy of Sciences of the United States of America 105(44):17061-6, 2008 Nov 4 - Who cited this? | PubMed ID: 18952845 | Fulltext

Hemodynamic Analysis of a Compliant Femoral Artery Bifurcation Model using a Fluid Structure Interaction Framework.

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Kim YH, Kim JE, Ito Y, Shih AM, Brott B, and Anayiotos A

Annals of biomedical engineering, 2008 Sep 16 - Who cited this? | PubMed ID: 18792781 | Fulltext

c-Myc and beta-catenin cooperate with loss of p53 to generate multiple members of the primitive neuroectodermal tumor family in mice.

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Momota H, Shih AH, Edgar MA, and Holland EC

Oncogene 27(32):4392, 2008 Jul 24 - Who cited this? | PubMed ID: 18372915 | Fulltext

Molecular models need to be tested: the case of a solar flares discoidal HDL model.

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Shih AY, Sligar SG, and Schulten K

Biophysical journal 94(12), 2008 Jun - Who cited this? | PubMed ID: 18375520 | Fulltext

Midazolam administration reverses thermal hyperalgesia and prevents gamma-aminobutyric acid transporter loss in a rodent model of neuropathic pain.

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Shih A, Miletic V, Miletic G, and Smith LJ

Anesthesia and analgesia 106(4):1296, 2008 Apr - Who cited this? | PubMed ID: 18349209 | Fulltext

The mitochondrial genome of the gymnosperm Cycas taitungensis contains a novel family of short interspersed elements, Bpu sequences, and abundant RNA editing sites.

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Chaw SM, Shih AC, Wang D, Wu YW, Liu SM, and Chou TY

Molecular biology and evolution 25(3):603, 2008 Mar - Who cited this? | PubMed ID: 18192697 | Fulltext

Association of autoantibodies with Ku and DNA repair proteins in connective tissue diseases.

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Schild-Poulter C, Su A, Shih A, Kelly OP, Fritzler MJ, Goldstein R, and Haché RJ

Rheumatology (Oxford, England) 47(2):165, 2008 Feb - Who cited this? | PubMed ID: 18208821 | Fulltext

Comparison between analgesic effects of buprenorphine, carprofen, and buprenorphine with carprofen for canine ovariohysterectomy.

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Shih AC, Robertson S, Isaza N, Pablo L, and Davies W

Veterinary anaesthesia and analgesia 35(1):69-79, 2008 Jan - Who cited this? | PubMed ID: 17850228 | Fulltext

Resveratrol is pro-apoptotic and thyroid hormone is anti-apoptotic in glioma cells: both actions are integrin and ERK mediated.

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Lin HY, Tang HY, Keating T, Wu YH, Shih A, Hammond D, Sun M, Hercbergs A, Davis FB, and Davis PJ

Carcinogenesis 29(1):62-9, 2008 Jan - Who cited this? | PubMed ID: 17984113 | Fulltext

Physicians: organize for high performance.

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Shih A

Medscape journal of medicine 10(5):118, 2008 - Who cited this? | PubMed ID: 18596899 | Fulltext

Computer modeling in biotechnology : a partner in development.

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Aksimentiev A, Brunner R, Cohen J, Comer J, Cruz-Chu E, Hardy D, Rajan A, Shih A, Sigalov G, Yin Y, and Schulten K

Methods in molecular biology (Clifton, N.J.) 474:181-234, 2008 - Who cited this? | PubMed ID: 19031067 | Fulltext

Comparison of the effects of caffeine and doxapram on respiratory and cardiovascular function in foals with induced respiratory acidosis.

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Giguère S, Sanchez LC, Shih A, Szabo NJ, Womble AY, and Robertson SA

Journal of the American Veterinary Medical Association 231(12):1863, 2007 Dec 15 - Who cited this? | PubMed ID: 18081526 | Fulltext

Influence of mRNA decay rates on the computational prediction of transcription rate profiles from gene expression profiles.

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Chin CF, Shih AC, and Fan KC

Journal of biosciences 32(7):1251, 2007 Dec - Who cited this? | PubMed ID: 18202449 | Fulltext

Comparison of the effects of caffeine and doxapram on respiratory and cardiovascular function in foals with induced respiratory acidosis.

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Giguère S, Sanchez LC, Shih A, Szabo NJ, Womble AY, and Robertson SA

American journal of veterinary research 68(12):1407-16, 2007 Dec - Who cited this? | PubMed ID: 18052748 | Fulltext

Assembly of lipids and proteins into lipoprotein particles.

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Shih AY, Arkhipov A, Freddolino PL, Sligar SG, and Schulten K

The journal of physical chemistry. B 111(38):11095-104, 2007 Sep 27 - Who cited this? | PubMed ID: 17696388 | Fulltext

Transfer of chloroplast genomic DNA to mitochondrial genome occurred at least 300 MYA.

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Wang D, Wu YW, Shih AC, Wu CS, Wang YN, and Chaw SM

Molecular biology and evolution 24(9):2040, 2007 Sep - Who cited this? | PubMed ID: 17609537 | Fulltext

DNA-PK phosphorylation sites on Oct-1 promote cell survival following DNA damage.

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Schild-Poulter C, Shih A, Tantin D, Yarymowich NC, Soubeyrand S, Sharp PA, and Haché RJ

Oncogene 26(27):3980-8, 2007 Jun 7 - Who cited this? | PubMed ID: 17213819 | Fulltext

A multiscale computational approach to dissect early events in the Erb family receptor mediated activation, differential signaling, and relevance to oncogenic transformations.

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Liu Y, Purvis J, Shih A, Weinstein J, Agrawal N, and Radhakrishnan R

Annals of biomedical engineering 35(6):1012, 2007 Jun - Who cited this? | PubMed ID: 17273938 | Fulltext

Disassembly of nanodiscs with cholate.

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Shih AY, Freddolino PL, Sligar SG, and Schulten K

Nano letters 7(6):1692-6, 2007 Jun - Who cited this? | PubMed ID: 17503871 | Fulltext

Simultaneous amino acid substitutions at antigenic sites drive influenza A hemagglutinin evolution.

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Shih AC, Hsiao TC, Ho MS, and Li WH

Proceedings of the National Academy of Sciences of the United States of America 104(15):6283, 2007 Apr 10 - Who cited this? | PubMed ID: 17395716 | Fulltext

Dopamine activates Nrf2-regulated neuroprotective pathways in astrocytes and meningeal cells.

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Shih AY, Erb H, and Murphy TH

Journal of neurochemistry 101(1):109-19, 2007 Apr - Who cited this? | PubMed ID: 17394461 | Fulltext

Mapping autism risk loci using genetic linkage and chromosomal rearrangements.

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, Szatmari P, Paterson AD, Zwaigenbaum L, Roberts W, Brian J, Liu XQ, Vincent JB, Skaug JL, Thompson AP, Senman L, Feuk L, Qian C, Bryson SE, Jones MB, Marshall CR,

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Nature genetics 39(3):319, 2007 Mar - Who cited this? | PubMed ID: 17322880 | Fulltext

Assembly of lipoprotein particles revealed by coarse-grained molecular dynamics simulations.

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Shih AY, Freddolino PL, Arkhipov A, and Schulten K

Journal of structural biology 157(3):579-92, 2007 Mar - Who cited this? | PubMed ID: 17070069 | Fulltext

Comparison of noninvasive cardiac output measured by use of partial carbon dioxide rebreathing or the lithium dilution method in anesthetized foals.

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Valverde A, Giguère S, Morey TE, Sanchez LC, and Shih A

American journal of veterinary research 68(2):141-7, 2007 Feb - Who cited this? | PubMed ID: 17269878 | Fulltext

Thyroid hormone is a MAPK-dependent growth factor for thyroid cancer cells and is anti-apoptotic.

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Lin HY, Tang HY, Shih A, Keating T, Cao G, Davis PJ, and Davis FB

Steroids 72(2):180-7, 2007 Feb - Who cited this? | PubMed ID: 17174366 | Fulltext

Nrf2 gene deletion fails to alter psychostimulant-induced behavior or neurotoxicity.

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Pacchioni AM, Vallone J, Melendez RI, Shih A, Murphy TH, and Kalivas PW

Brain research 1127(1):26-35, 2007 Jan 5 - Who cited this? | PubMed ID: 17113054 | Fulltext

Phylo-mLogo: an interactive and hierarchical multiple-logo visualization tool for alignment of many sequences.

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Shih AC, Lee DT, Peng CL, and Wu YW

BMC bioinformatics 8:63, 2007 - Who cited this? | PubMed ID: 17319966 | Fulltext

Medicare's quality improvement organization program value in nursing homes.

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Shih A, Dewar DM, and Hartman T

Health care financing review 28(3):109-16, 2007 - Who cited this? | PubMed ID: 17645159 | Fulltext

Intermittent pressure decreases human keratinocyte proliferation in vitro.

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Nasca MR, Shih AT, West DP, Martinez WM, Micali G, and Landsman AS

Skin pharmacology and physiology 20(6):305-12, 2007 - Who cited this? | PubMed ID: 17851275 | Fulltext

Role of corticosteroids in palliative care.

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Shih A and Jackson KC

Journal of pain & palliative care pharmacotherapy 21(4):69-76, 2007 - Who cited this? | PubMed ID: 18032321 | Fulltext

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