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Papers authored by Rual JF

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Shifted Transversal Design smart-pooling for high coverage interactome mapping.

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Xin X, Rual JF, Hirozane-Kishikawa T, Hill DE, Vidal M, Boone C, and Thierry-Mieg N

Genome research 19(7):1262-9, 2009 Jul - Who cited this? | PubMed ID: 19447967 | Fulltext

An experimentally derived confidence score for binary protein-protein interactions.

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Braun P, Tasan M, Dreze M, Barrios-Rodiles M, Lemmens I, Yu H, Sahalie JM, Murray RR, Roncari L, de Smet AS, Venkatesan K, Rual JF, Vandenhaute J, Cusick ME, Pawson T, Hill DE,

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Nature methods 6(1):91-7, 2009 Jan - Who cited this? | PubMed ID: 19060903 | Fulltext

An empirical framework for binary interactome mapping.

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Venkatesan K, Rual JF, Vazquez A, Stelzl U, Lemmens I, Hirozane-Kishikawa T, Hao T, Zenkner M, Xin X, Goh KI, Yildirim MA, Simonis N, Heinzmann K, Gebreab F, Sahalie JM, Cevik S,

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Nature methods 6(1):83-90, 2009 Jan - Who cited this? | PubMed ID: 19060904 | Fulltext

Literature-curated protein interaction datasets.

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Cusick ME, Yu H, Smolyar A, Venkatesan K, Carvunis AR, Simonis N, Rual JF, Borick H, Braun P, Dreze M, Vandenhaute J, Galli M, Yazaki J, Hill DE, Ecker JR, Roth FP,

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Nature methods 6(1):39-46, 2009 Jan - Who cited this? | PubMed ID: 19116613 | Fulltext

Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network.

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Simonis N, Rual JF, Carvunis AR, Tasan M, Lemmens I, Hirozane-Kishikawa T, Hao T, Sahalie JM, Venkatesan K, Gebreab F, Cevik S, Klitgord N, Fan C, Braun P, Li N, Ayivi-Guedehoussou N,

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Nature methods 6(1):47-54, 2009 Jan - Who cited this? | PubMed ID: 19123269 | Fulltext

High-Quality Binary Protein Interaction Map of the Yeast Interactome Network.

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Yu H, Braun P, Yildirim MA, Lemmens I, Venkatesan K, Sahalie J, Hirozane-Kishikawa T, Gebreab F, Li N, Simonis N, Hao T, Rual JF, Dricot A, Vazquez A, Murray RR, Simon C,

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Science (New York, N.Y.), 2008 Aug 21 - Who cited this? | PubMed ID: 18719252 | Fulltext

Network modeling links breast cancer susceptibility and centrosome dysfunction.

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Pujana MA, Han JD, Starita LM, Stevens KN, Tewari M, Ahn JS, Rennert G, Moreno V, Kirchhoff T, Gold B, Assmann V, Elshamy WM, Rual JF, Levine D, Rozek LS, Gelman RS,

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Nature genetics 39(11):1338, 2007 Nov - Who cited this? | PubMed ID: 17922014 | Fulltext

Association of Dishevelled with the clathrin AP-2 adaptor is required for Frizzled endocytosis and planar cell polarity signaling.

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Yu A, Rual JF, Tamai K, Harada Y, Vidal M, He X, and Kirchhausen T

Developmental cell 12(1):129, 2007 Jan - Who cited this? | PubMed ID: 17199046 | Fulltext

Novel insights into RNAi off-target effects using C. elegans paralogs.

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Rual JF, Klitgord N, and Achaz G

BMC genomics 8:106, 2007 - Who cited this? | PubMed ID: 17445269 | Fulltext

Large-scale RNAi screens identify novel genes that interact with the C. elegans retinoblastoma pathway as well as splicing-related components with synMuv B activity.

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Ceron J, Rual JF, Chandra A, Dupuy D, Vidal M, and van den Heuvel S

BMC developmental biology 7:30, 2007 - Who cited this? | PubMed ID: 17417969 | Fulltext

A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration.

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Lim J, Hao T, Shaw C, Patel AJ, Szabó G, Rual JF, Fisk CJ, Li N, Smolyar A, Hill DE, Barabási AL, Vidal M, and Zoghbi HY

Cell 125(4):801, 2006 May 19 - Who cited this? | PubMed ID: 16713569 | Fulltext

Towards a proteome-scale map of the human protein-protein interaction network.

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Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S, Rosenberg J, Goldberg DS,

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Nature 437(7062):1173, 2005 Oct 20 - Who cited this? | PubMed ID: 16189514 | Fulltext

Systematic analysis of genes required for synapse structure and function.

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Sieburth D, Ch'ng Q, Dybbs M, Tavazoie M, Kennedy S, Wang D, Dupuy D, Rual JF, Hill DE, Vidal M, Ruvkun G, and Kaplan JM

Nature 436(7050):510, 2005 Jul 28 - Who cited this? | PubMed ID: 16049479 | Fulltext

Biochemical clustering of monomeric GTPases of the Ras superfamily.

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Caruso ME, Jenna S, Beaulne S, Lee EH, Bergeron A, Chauve C, Roby P, Rual JF, Hill DE, Vidal M, Bossé R, and Chevet E

Molecular & cellular proteomics : MCP 4(7):936-44, 2005 Jul - Who cited this? | PubMed ID: 15814614 | Fulltext

Functional genomic analysis of RNA interference in C. elegans.

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Kim JK, Gabel HW, Kamath RS, Tewari M, Pasquinelli A, Rual JF, Kennedy S, Dybbs M, Bertin N, Kaplan JM, Vidal M, and Ruvkun G

Science (New York, N.Y.) 308(5725):1164-7, 2005 May 20 - Who cited this? | PubMed ID: 15790806 | Fulltext

New genes with roles in the C. elegans embryo revealed using RNAi of ovary-enriched ORFeome clones.

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Fernandez AG, Gunsalus KC, Huang J, Chuang LS, Ying N, Liang HL, Tang C, Schetter AJ, Zegar C, Rual JF, Hill DE, Reinke V, Vidal M, and Piano F

Genome research 15(2):250-9, 2005 Feb - Who cited this? | PubMed ID: 15687288 | Fulltext

Human ORFeome version 1.1: a platform for reverse proteomics.

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Rual JF, Hirozane-Kishikawa T, Hao T, Bertin N, Li S, Dricot A, Li N, Rosenberg J, Lamesch P, Vidalain PO, Clingingsmith TR, Hartley JL, Esposito D, Cheo D, Moore T, Simmons B,

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Genome research 14(10B):2128, 2004 Oct - Who cited this? | PubMed ID: 15489335 | Fulltext

Generation of the Brucella melitensis ORFeome version 1.1.

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Dricot A, Rual JF, Lamesch P, Bertin N, Dupuy D, Hao T, Lambert C, Hallez R, Delroisse JM, Vandenhaute J, Lopez-Goñi I, Moriyon I, Garcia-Lobo JM, Sangari FJ, MacMillan AP, Cutler SJ,

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Genome research 14(10B):2201, 2004 Oct - Who cited this? | PubMed ID: 15489343 | Fulltext

Toward improving Caenorhabditis elegans phenome mapping with an ORFeome-based RNAi library.

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Rual JF, Ceron J, Koreth J, Hao T, Nicot AS, Hirozane-Kishikawa T, Vandenhaute J, Orkin SH, Hill DE, van den Heuvel S, and Vidal M

Genome research 14(10B):2162-8, 2004 Oct - Who cited this? | PubMed ID: 15489339 | Fulltext

Systematic interactome mapping and genetic perturbation analysis of a C. elegans TGF-beta signaling network.

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Tewari M, Hu PJ, Ahn JS, Ayivi-Guedehoussou N, Vidalain PO, Li S, Milstein S, Armstrong CM, Boxem M, Butler MD, Busiguina S, Rual JF, Ibarrola N, Chaklos ST, Bertin N, Vaglio P,

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Molecular cell 13(4):469, 2004 Feb 27 - Who cited this? | PubMed ID: 14992718 | Fulltext

ORFeome projects: gateway between genomics and omics.

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Rual JF, Hill DE, and Vidal M

Current opinion in chemical biology 8(1):20-5, 2004 Feb - Who cited this? | PubMed ID: 15036152 | Fulltext

A map of the interactome network of the metazoan C. elegans.

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Li S, Armstrong CM, Bertin N, Ge H, Milstein S, Boxem M, Vidalain PO, Han JD, Chesneau A, Hao T, Goldberg DS, Li N, Martinez M, Rual JF, Lamesch P, Xu L,

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Science (New York, N.Y.) 303(5657):540, 2004 Jan 23 - Who cited this? | PubMed ID: 14704431 | Fulltext

C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression.

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Reboul J, Vaglio P, Rual JF, Lamesch P, Martinez M, Armstrong CM, Li S, Jacotot L, Bertin N, Janky R, Moore T, Hudson JR, Hartley JL, Brasch MA, Vandenhaute J, Boulton S,

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Nature genetics 34(1):35-41, 2003 May - Who cited this? | PubMed ID: 12679813 | Fulltext

WorfDB: the Caenorhabditis elegans ORFeome Database.

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Vaglio P, Lamesch P, Reboul J, Rual JF, Martinez M, Hill D, and Vidal M

Nucleic acids research 31(1):237, 2003 Jan 1 - Who cited this? | PubMed ID: 12519990 | Fulltext

Gene control in germinal differentiation: RNF6, a transcription regulatory protein in the mouse sertoli cell.

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Lopez P, Vidal F, Martin L, Lopez-Fernandez LA, Rual JF, Rosen BS, Cuzin F, and Rassoulzadegan M

Molecular and cellular biology 22(10):3488-96, 2002 May - Who cited this? | PubMed ID: 11971979 | Fulltext

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