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Papers authored by Quake SR

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Experimental determination of the evolvability of a transcription factor.

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Maerkl SJ and Quake SR

Proceedings of the National Academy of Sciences of the United States of America 106(44):18650-5, 2009 Nov 3 - Who cited this? | PubMed ID: 19841254 | Fulltext

Single-molecule sequencing of an individual human genome.

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Pushkarev D, Neff NF, and Quake SR

Nature biotechnology 27(9):847-50, 2009 Sep - Who cited this? | PubMed ID: 19668243 | Fulltext

Automated microfluidic chromatin immunoprecipitation from 2,000 cells.

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Wu AR, Hiatt JB, Lu R, Attema JL, Lobo NA, Weissman IL, Clarke MF, and Quake SR

Lab on a chip 9(10):1365-70, 2009 May 21 - Who cited this? | PubMed ID: 19417902 | Fulltext

High-throughput sequencing of the zebrafish antibody repertoire.

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Weinstein JA, Jiang N, White RA, Fisher DS, and Quake SR

Science (New York, N.Y.) 324(5928):807-10, 2009 May 8 - Who cited this? | PubMed ID: 19423829 | Fulltext

Microfluidic digital PCR enables rapid prenatal diagnosis of fetal aneuploidy.

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Fan HC, Blumenfeld YJ, El-Sayed YY, Chueh J, and Quake SR

American journal of obstetrics and gynecology 200(5):543.e1-7, 2009 May - Who cited this? | PubMed ID: 19375573 | Fulltext

Association of reactive oxygen species levels and radioresistance in cancer stem cells.

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Diehn M, Cho RW, Lobo NA, Kalisky T, Dorie MJ, Kulp AN, Qian D, Lam JS, Ailles LE, Wong M, Joshua B, Kaplan MJ, Wapnir I, Dirbas FM, Somlo G, Garberoglio C,

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Nature 458(7239):780-3, 2009 Apr 9 - Who cited this? | PubMed ID: 19194462 | Fulltext

In vitro embryo culture in defined, sub-microliter volumes.

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Melin J, Lee A, Foygel K, Leong DE, Quake SR, and Yao MW

Developmental dynamics : an official publication of the American Association of Anatomists 238(4):950-5, 2009 Apr - Who cited this? | PubMed ID: 19301395 | Fulltext

An in vitro microfluidic approach to generating protein-interaction networks.

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Gerber D, Maerkl SJ, and Quake SR

Nature methods 6(1):71-4, 2009 Jan - Who cited this? | PubMed ID: 19098921 | Fulltext

Digital PCR provides sensitive and absolute calibration for high throughput sequencing.

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White RA, Blainey PC, Fan HC, and Quake SR

BMC genomics 10:116, 2009 - Who cited this? | PubMed ID: 19298667 | Fulltext

Noninvasive diagnosis of fetal aneuploidy by shotgun sequencing DNA from maternal blood.

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Fan HC, Blumenfeld YJ, Chitkara U, Hudgins L, and Quake SR

Proceedings of the National Academy of Sciences of the United States of America, 2008 Oct 6 - Who cited this? | PubMed ID: 18838674 | Fulltext

Discovery of a hepatitis C target and its pharmacological inhibitors by microfluidic affinity analysis.

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Einav S, Gerber D, Bryson PD, Sklan EH, Elazar M, Maerkl SJ, Glenn JS, and Quake SR

Nature biotechnology 26(9):1019-27, 2008 Sep - Who cited this? | PubMed ID: 18758449 | Fulltext

Single-molecule DNA sequencing of a viral genome.

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Harris TD, Buzby PR, Babcock H, Beer E, Bowers J, Braslavsky I, Causey M, Colonell J, Dimeo J, Efcavitch JW, Giladi E, Gill J, Healy J, Jarosz M, Lapen D, Moulton K,

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Science (New York, N.Y.) 320(5872):106, 2008 Apr 4 - Who cited this? | PubMed ID: 18388294 | Fulltext

A synthetic Escherichia coli predator-prey ecosystem.

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Balagaddé FK, Song H, Ozaki J, Collins CH, Barnet M, Arnold FH, Quake SR, and You L

Molecular systems biology 4:187, 2008 - Who cited this? | PubMed ID: 18414488 | Fulltext

A microfluidic processor for gene expression profiling of single human embryonic stem cells.

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Zhong JF, Chen Y, Marcus JS, Scherer A, Quake SR, Taylor CR, and Weiner LP

Lab on a chip 8(1):68, 2008 Jan - Who cited this? | PubMed ID: 18094763 | Fulltext

Transcriptional instability is not a universal attribute of aging.

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Warren LA, Rossi DJ, Schiebinger GR, Weissman IL, Kim SK, and Quake SR

Aging cell 6(6):775, 2007 Dec - Who cited this? | PubMed ID: 17925006 | Fulltext

Versatile, fully automated, microfluidic cell culture system.

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Gómez-Sjöberg R, Leyrat AA, Pirone DM, Chen CS, and Quake SR

Analytical chemistry 79(22):8557, 2007 Nov 15 - Who cited this? | PubMed ID: 17953452 | Fulltext

Detection of aneuploidy with digital polymerase chain reaction.

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Fan HC and Quake SR

Analytical chemistry 79(19):7576, 2007 Oct 1 - Who cited this? | PubMed ID: 17715994 | Fulltext

Nanoliter reactors improve multiple displacement amplification of genomes from single cells.

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Marcy Y, Ishoey T, Lasken RS, Stockwell TB, Walenz BP, Halpern AL, Beeson KY, Goldberg SM, and Quake SR

PLoS genetics 3(9):1702, 2007 Sep - Who cited this? | PubMed ID: 17892324 | Fulltext

Dissecting biological "dark matter" with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth.

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Marcy Y, Ouverney C, Bik EM, Lösekann T, Ivanova N, Martin HG, Szeto E, Platt D, Hugenholtz P, Relman DA, and Quake SR

Proceedings of the National Academy of Sciences of the United States of America 104(29):11889, 2007 Jul 17 - Who cited this? | PubMed ID: 17620602 | Fulltext

Crystal structure of a hyperactive Escherichia coli glycerol kinase mutant Gly230 --> Asp obtained using microfluidic crystallization devices.

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Anderson MJ, DeLaBarre B, Raghunathan A, Palsson BO, Brunger AT, and Quake SR

Biochemistry 46(19):5722, 2007 May 15 - Who cited this? | PubMed ID: 17441732 | Fulltext

A systems approach to measuring the binding energy landscapes of transcription factors.

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Maerkl SJ and Quake SR

Science (New York, N.Y.) 315(5809):233, 2007 Jan 12 - Who cited this? | PubMed ID: 17218526 | Fulltext

Microfluidic large-scale integration: the evolution of design rules for biological automation.

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Melin J and Quake SR

Annual review of biophysics and biomolecular structure 36:213, 2007 - Who cited this? | PubMed ID: 17269901 | Fulltext

Solvent resistant microfluidic DNA synthesizer.

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Huang Y, Castrataro P, Lee CC, and Quake SR

Lab on a chip 7(1):24, 2007 Jan - Who cited this? | PubMed ID: 17180201 | Fulltext

Fluorescence near-field microscopy of DNA at sub-10 nm resolution.

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Ma Z, Gerton JM, Wade LA, and Quake SR

Physical review letters 97(26):260801, 2006 Dec 31 - Who cited this? | PubMed ID: 17280412 | Fulltext

Microfluidic digital PCR enables multigene analysis of individual environmental bacteria.

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Ottesen EA, Hong JW, Quake SR, and Leadbetter JR

Science (New York, N.Y.) 314(5804):1464, 2006 Dec 1 - Who cited this? | PubMed ID: 17138901 | Fulltext

Transcription factor profiling in individual hematopoietic progenitors by digital RT-PCR.

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Warren L, Bryder D, Weissman IL, and Quake SR

Proceedings of the National Academy of Sciences of the United States of America 103(47):17807, 2006 Nov 21 - Who cited this? | PubMed ID: 17098862 | Fulltext

Phase knowledge enables rational screens for protein crystallization.

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Anderson MJ, Hansen CL, and Quake SR

Proceedings of the National Academy of Sciences of the United States of America 103(45):16746, 2006 Nov 7 - Who cited this? | PubMed ID: 17075056 | Fulltext

Developing optofluidic technology through the fusion of microfluidics and optics.

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Psaltis D, Quake SR, and Yang C

Nature 442(7101):381, 2006 Jul 27 - Who cited this? | PubMed ID: 16871205 | Fulltext

Microfluidic single-cell mRNA isolation and analysis.

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Marcus JS, Anderson WF, and Quake SR

Analytical chemistry 78(9):3084, 2006 May 1 - Who cited this? | PubMed ID: 16642997 | Fulltext

A microfluidic device for kinetic optimization of protein crystallization and in situ structure determination.

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Hansen CL, Classen S, Berger JM, and Quake SR

Journal of the American Chemical Society 128(10):3142, 2006 Mar 15 - Who cited this? | PubMed ID: 16522084 | Fulltext

Anomalous vibrational dispersion in holographically trapped colloidal arrays.

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Polin M, Grier DG, and Quake SR

Physical review letters 96(8):88101, 2006 Mar 3 - Who cited this? | PubMed ID: 16606228 | Fulltext

Parallel picoliter rt-PCR assays using microfluidics.

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Marcus JS, Anderson WF, and Quake SR

Analytical chemistry 78(3):956, 2006 Feb 1 - Who cited this? | PubMed ID: 16448074 | Fulltext

High-throughput multi-antigen microfluidic fluorescence immunoassays.

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Kartalov EP, Zhong JF, Scherer A, Quake SR, Taylor CR, and Anderson WF

BioTechniques 40(1):85, 2006 Jan - Who cited this? | PubMed ID: 16454045 | Fulltext

Effects of a modified dye-labeled nucleotide spacer arm on incorporation by thermophilic DNA polymerases.

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Lacenere C, Garg MK, Stoltz BM, and Quake SR

Nucleosides, nucleotides & nucleic acids 25(1):9, 2006 - Who cited this? | PubMed ID: 16440981 | Fulltext

Multistep synthesis of a radiolabeled imaging probe using integrated microfluidics.

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Lee CC, Sui G, Elizarov A, Shu CJ, Shin YS, Dooley AN, Huang J, Daridon A, Wyatt P, Stout D, Kolb HC, Witte ON, Satyamurthy N, Heath JR, Phelps ME, Quake SR,

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Science (New York, N.Y.) 310(5755):1793, 2005 Dec 16 - Who cited this? | PubMed ID: 16357255 | Fulltext

A ligand-free solid-supported system for Sonogashira couplings: applications in nucleoside chemistry.

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Garg NK, Woodroofe CC, Lacenere CJ, Quake SR, and Stoltz BM

Chemical communications (Cambridge, England)(36):4551, 2005 Sep 28 - Who cited this? | PubMed ID: 16158111 | Fulltext

Long-term monitoring of bacteria undergoing programmed population control in a microchemostat.

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Balagaddé FK, You L, Hansen CL, Arnold FH, and Quake SR

Science (New York, N.Y.) 309(5731):137, 2005 Jul 1 - Who cited this? | PubMed ID: 15994559 | Fulltext

Tip-enhanced fluorescence microscopy at 10 nanometer resolution.

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Gerton JM, Wade LA, Lessard GA, Ma Z, and Quake SR

Physical review letters 93(18):180801, 2004 Oct 29 - Who cited this? | PubMed ID: 15525147 | Fulltext

Systematic investigation of protein phase behavior with a microfluidic formulator.

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Hansen CL, Sommer MO, and Quake SR

Proceedings of the National Academy of Sciences of the United States of America 101(40):14431, 2004 Oct 5 - Who cited this? | PubMed ID: 15452343 | Fulltext

A nanoliter-scale nucleic acid processor with parallel architecture.

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Hong JW, Studer V, Hang G, Anderson WF, and Quake SR

Nature biotechnology 22(4):435, 2004 Apr - Who cited this? | PubMed ID: 15024389 | Fulltext

A microfluidic rectifier: anisotropic flow resistance at low Reynolds numbers.

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Groisman A and Quake SR

Physical review letters 92(9):94501, 2004 Mar 5 - Who cited this? | PubMed ID: 15089471 | Fulltext

Solvent-resistant photocurable liquid fluoropolymers for microfluidic device fabrication [corrected].

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Rolland JP, Van Dam RM, Schorzman DA, Quake SR, and Desimone JM

Journal of the American Chemical Society 126(8):2322, 2004 Mar 3 - Who cited this? | PubMed ID: 14982433 | Fulltext

Microfluidic device reads up to four consecutive base pairs in DNA sequencing-by-synthesis.

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Kartalov EP and Quake SR

Nucleic acids research 32(9):2873, 2004 - Who cited this? | PubMed ID: 15155856 | Fulltext

Behavior of complex knots in single DNA molecules.

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Bao XR, Lee HJ, and Quake SR

Physical review letters 91(26 Pt 1):265506, 2003 Dec 31 - Who cited this? | PubMed ID: 14754067 | Fulltext

Microfluidics in structural biology: smaller, faster em leader better.

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Hansen C and Quake SR

Current opinion in structural biology 13(5):538, 2003 Oct - Who cited this? | PubMed ID: 14568607 | Fulltext

Integrated nanoliter systems.

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Hong JW and Quake SR

Nature biotechnology 21(10):1179, 2003 Oct - Who cited this? | PubMed ID: 14520403 | Fulltext

Microfabricated fountain pens for high-density DNA arrays.

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Reese MO, Van Dam RM, Scherer A, and Quake SR

Genome research 13(10):2348, 2003 Oct - Who cited this? | PubMed ID: 12975313 | Fulltext

Solving the "world-to-chip" interface problem with a microfluidic matrix.

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Liu J, Hansen C, and Quake SR

Analytical chemistry 75(18):4718, 2003 Sep 15 - Who cited this? | PubMed ID: 14674446 | Fulltext

Microfluidic memory and control devices.

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Groisman A, Enzelberger M, and Quake SR

Science (New York, N.Y.) 300(5621):955-8, 2003 May 9 - Who cited this? | PubMed ID: 12738857 | Fulltext

Sequence information can be obtained from single DNA molecules.

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Braslavsky I, Hebert B, Kartalov E, and Quake SR

Proceedings of the National Academy of Sciences of the United States of America 100(7):3960-4, 2003 Apr 1 - Who cited this? | PubMed ID: 12651960 | Fulltext

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