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Papers authored by Narumi T

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Synthesis and biological evaluation of selective CXCR4 antagonists containing alkene dipeptide isosteres.

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Narumi T, Hayashi R, Tomita K, Kobayashi K, Tanahara N, Ohno H, Naito T, Kodama E, Matsuoka M, Oishi S, and Fujii N

Organic & biomolecular chemistry 8(3):616-21, 2010 Feb 7 - Who cited this? | PubMed ID: 20090978 | Fulltext

CD4 mimics targeting the mechanism of HIV entry.

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Yamada Y, Ochiai C, Yoshimura K, Tanaka T, Ohashi N, Narumi T, Nomura W, Harada S, Matsushita S, and Tamamura H

Bioorganic & medicinal chemistry letters 20(1):354-8, 2010 Jan 1 - Who cited this? | PubMed ID: 19926478 | Fulltext

Current performance gains from utilizing the GPU or the ASIC MDGRAPE-3 within an enhanced Poisson Boltzmann approach.

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Narumi T, Yasuoka K, Taiji M, and Höfinger S

Journal of computational chemistry 30(14):2351-7, 2009 Nov 15 - Who cited this? | PubMed ID: 19350574 | Fulltext

Synthesis of protein kinase Cdelta C1b domain by native chemical ligation methodology and characterization of its folding and ligand binding.

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Ohashi N, Nomura W, Kato M, Narumi T, Lewin NE, Blumberg PM, and Tamamura H

Journal of peptide science : an official publication of the European Peptide Society 15(10):642-6, 2009 Oct - Who cited this? | PubMed ID: 19672879 | Fulltext

High-performance drug discovery: computational screening by combining docking and molecular dynamics simulations.

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Okimoto N, Futatsugi N, Fuji H, Suenaga A, Morimoto G, Yanai R, Ohno Y, Narumi T, and Taiji M

PLoS computational biology 5(10):e1000528, 2009 Oct - Who cited this? | PubMed ID: 19816553 | Fulltext

Structure-activity relationship study on artificial CXCR4 ligands possessing the cyclic pentapeptide scaffold: the exploration of amino acid residues of pentapeptides by substitutions of several aromatic amino acids.

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Tanaka T, Nomura W, Narumi T, Esaka A, Oishi S, Ohashi N, Itotani K, Evans BJ, Wang ZX, Peiper SC, Fujii N, and Tamamura H

Organic & biomolecular chemistry 7(18):3805-9, 2009 Sep 21 - Who cited this? | PubMed ID: 19707686 | Fulltext

Peptide bond mimicry by (E)-alkene and (Z)-fluoroalkene peptide isosteres: synthesis and bioevaluation of alpha-helical anti-HIV peptide analogues.

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Oishi S, Kamitani H, Kodera Y, Watanabe K, Kobayashi K, Narumi T, Tomita K, Ohno H, Naito T, Kodama E, Matsuoka M, and Fujii N

Organic & biomolecular chemistry 7(14):2872-7, 2009 Jul 21 - Who cited this? | PubMed ID: 19582296 | Fulltext

Difference in the functional significance between the lemniscal and paralemniscal pathways in the perception of direction of single-whisker stimulation examined by muscimol microinjection.

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Nakamura S, Narumi T, Tsutsui K, and Iijima T

Neuroscience research 64(3):323-9, 2009 Jul - Who cited this? | PubMed ID: 19376165 | Fulltext

Amino acid-based synthesis of trifluoromethylalkene dipeptide isosteres by alcohol-assisted nucleophilic trifluoromethylation and organozinc-copper-mediated S(N)2' alkylation.

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Kobayashi K, Narumi T, Oishi S, Ohno H, and Fujii N

The Journal of organic chemistry 74(12):4626-9, 2009 Jun 19 - Who cited this? | PubMed ID: 19445465 | Fulltext

Synthesis of fluoroalkene dipeptide isosteres by an intramolecular redox reaction utilizing N-heteorocyclic carbenes (NHCs).

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Yamaki Y, Shigenaga A, Tomita K, Narumi T, Fujii N, and Otaka A

The Journal of organic chemistry 74(9):3272-7, 2009 May 1 - Who cited this? | PubMed ID: 19331367 | Fulltext

Synthesis and application of (Z)-alkene- and (E)-fluoroalkene-dipeptide isosteres as cis-amide equivalents.

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Tomita K, Narumi T, Niida A, Oishi S, Ohno H, and Fujii N

Advances in experimental medicine and biology 611:365-6, 2009 - Who cited this? | PubMed ID: 19400228 | Fulltext

Results of a Questionnaire Survey on Window Setting and FOV on CT Images of Examinations.

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Anzui M, Tsujioka K, Asano K, Goto T, Sekitani T, Kawaguchi D, and Narumi T

Nippon Hoshasen Gijutsu Gakkai zasshi 64(6):714-8, 2008 Jun 20 - Who cited this? | PubMed ID: 18648161 | Fulltext

Efficient synthesis of trifluoromethyl and related trisubstituted alkene dipeptide isosteres by palladium-catalyzed carbonylation of amino acid derived allylic carbonates.

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Inokuchi E, Narumi T, Niida A, Kobayashi K, Tomita K, Oishi S, Ohno H, and Fujii N

The Journal of organic chemistry 73(10):3942, 2008 May 16 - Who cited this? | PubMed ID: 18412390 | Fulltext

Involvement of the ethylene response pathway in dormancy induction in chrysanthemum.

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Sumitomo K, Narumi T, Satoh S, and Hisamatsu T

Journal of experimental botany 59(15):4075-82, 2008 - Who cited this? | PubMed ID: 18952907 | Fulltext

Cutoff radius effect of isotropic periodic sum method for transport coefficients of Lennard-Jones liquid.

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Takahashi K, Yasuoka K, and Narumi T

The Journal of chemical physics 127(11):114511, 2007 Sep 21 - Who cited this? | PubMed ID: 17887861 | Fulltext

Facile synthesis of fluoroalkenes by palladium-catalyzed reductive defluorination of allylic gem-difluorides.

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Narumi T, Tomita K, Inokuchi E, Kobayashi K, Oishi S, Ohno H, and Fujii N

Organic letters 9(17):3465-8, 2007 Aug 16 - Who cited this? | PubMed ID: 17655320 | Fulltext

Folding dynamics of 10-residue beta-hairpin peptide chignolin.

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Suenaga A, Narumi T, Futatsugi N, Yanai R, Ohno Y, Okimoto N, and Taiji M

Chemistry, an Asian journal 2(5):591-8, 2007 May 4 - Who cited this? | PubMed ID: 17465405 | Fulltext

Impairment of the discrimination of the direction of single-whisker stimulation induced by the lemniscal pathway lesion.

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Narumi T, Nakamura S, Takashima I, Kakei S, Tsutsui K, and Iijima T

Neuroscience research 57(4):579, 2007 Apr - Who cited this? | PubMed ID: 17313984 | Fulltext

Fmoc-based solid-phase synthesis of GPR54-agonistic pentapeptide derivatives containing alkene- and fluoroalkene-dipeptide isosteres.

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Tomita K, Narumi T, Niida A, Oishi S, Ohno H, and Fujii N

Biopolymers 88(2):272-8, 2007 - Who cited this? | PubMed ID: 17216632 | Fulltext

Synthesis of novel cross-linked fluorinated cooligomeric nanoparticles: synthetic approach to colloidal stable fluorinated magnetic nanocomposites.

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Yoshioka H, Narumi T, and Sawada H

Journal of oleo science 56(7):377-83, 2007 - Who cited this? | PubMed ID: 17898504 | Fulltext

A novel one-pot reaction involving organocopper-mediated reduction/transmetalation/asymmetric alkylation, leading to the diastereoselective synthesis of functionalized (Z)-fluoroalkene dipeptide isosteres.

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Narumi T, Niida A, Tomita K, Oishi S, Otaka A, Ohno H, and Fujii N

Chemical communications (Cambridge, England)(45):4720-2, 2006 Dec 7 - Who cited this? | PubMed ID: 17109048 | Fulltext

Synthesis of (Z)-alkene and (E)-fluoroalkene-containing diketopiperazine mimetics utilizing organocopper-mediated reduction-alkylation and diastereoselectivity examination using DFT calculations.

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Niida A, Mizumoto M, Narumi T, Inokuchi E, Oishi S, Ohno H, Otaka A, Kitaura K, and Fujii N

The Journal of organic chemistry 71(11):4118-29, 2006 May 26 - Who cited this? | PubMed ID: 16709051 | Fulltext

Structure and dynamics of RNA polymerase II elongation complex.

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Suenaga A, Okimoto N, Futatsugi N, Hirano Y, Narumi T, Ohno Y, Yanai R, Hirokawa T, Ebisuzaki T, Konagaya A, and Taiji M

Biochemical and biophysical research communications 343(1):90-8, 2006 Apr 28 - Who cited this? | PubMed ID: 16529717 | Fulltext

CT and MRI findings of a solitary extramedullary plasmacytoma of the oropharynx: case report.

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Narumi T, Kozawa E, Heshiki A, Tomoda M, and Shimizu Y

Radiation medicine 23(8):574-7, 2005 Dec - Who cited this? | PubMed ID: 16555568 | Fulltext

Novel mechanism of interaction of p85 subunit of phosphatidylinositol 3-kinase and ErbB3 receptor-derived phosphotyrosyl peptides.

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Suenaga A, Takada N, Hatakeyama M, Ichikawa M, Yu X, Tomii K, Okimoto N, Futatsugi N, Narumi T, Shirouzu M, Yokoyama S, Konagaya A, and Taiji M

The Journal of biological chemistry 280(2):1321-6, 2005 Jan 14 - Who cited this? | PubMed ID: 15520002 | Fulltext

Nanoscale hydrophobic interaction and nanobubble nucleation.

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Koishi T, Yoo S, Yasuoka K, Zeng XC, Narumi T, Susukita R, Kawai A, Furusawa H, Suenaga A, Okimoto N, Futatsugi N, and Ebisuzaki T

Physical review letters 93(18):185701, 2004 Oct 29 - Who cited this? | PubMed ID: 15525179 | Fulltext

Tyr-317 phosphorylation increases Shc structural rigidity and reduces coupling of domain motions remote from the phosphorylation site as revealed by molecular dynamics simulations.

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Suenaga A, Kiyatkin AB, Hatakeyama M, Futatsugi N, Okimoto N, Hirano Y, Narumi T, Kawai A, Susukita R, Koishi T, Furusawa H, Yasuoka K, Takada N, Ohno Y, Taiji M, Ebisuzaki T,

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The Journal of biological chemistry 279(6):4657, 2004 Feb 6 - Who cited this? | PubMed ID: 14613932 | Fulltext

Molecular dynamics, free energy, and SPR analyses of the interactions between the SH2 domain of Grb2 and ErbB phosphotyrosyl peptides.

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Suenaga A, Hatakeyama M, Ichikawa M, Yu X, Futatsugi N, Narumi T, Fukui K, Terada T, Taiji M, Shirouzu M, Yokoyama S, and Konagaya A

Biochemistry 42(18):5195-200, 2003 May 13 - Who cited this? | PubMed ID: 12731860 | Fulltext

The phenol red thread tear test: a cross-cultural study.

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Sakamoto R, Bennett ES, Henry VA, Paragina S, Narumi T, Izumi Y, Kamei Y, Nagatomi E, Miyanaga Y, and Hamano H

Investigative ophthalmology & visual science 34(13):3510-4, 1993 Dec - Who cited this? | PubMed ID: 8258507 | Fulltext

[Studies on urinary tract infection. I. Examination of microorganisms in primary infection].

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Yamamoto C, Narumi T, Ito T, Hirose H, and Masunaga A

Nippon Hinyokika Gakkai zasshi. The japanese journal of urology 58(3):268-78, 1967 Mar - Who cited this? | PubMed ID: 6069428 | Fulltext

[Studies on urinary tract infection. II. Examination of microorganisms in secondary infection].

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Yamamoto C, Narumi T, Ito T, Hirose H, and Masunaga A

Nippon Hinyokika Gakkai zasshi. The japanese journal of urology 58(3):279-88, 1967 Mar - Who cited this? | PubMed ID: 6069429 | Fulltext

Studies on urinary tract infection. II. 3. Gram-negative rods isolated from lesions in the mortar kidney].

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Yamamoto C, Narumi T, Ito T, Hirose H, and Masunaga A

Nippon Hinyokika Gakkai zasshi. The japanese journal of urology 58(3):289-96, 1967 Mar - Who cited this? | PubMed ID: 6069430 | Fulltext

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