Papers authored by Minh DD

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Optimal estimators and asymptotic variances for nonequilibrium path-ensemble averages.
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Minh DD and Chodera JD
The Journal of chemical physics 131(13):134110, 2009 Oct 7 - Who cited this? | PubMed ID: 19814546 | Fulltext
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Density-dependent analysis of nonequilibrium paths improves free energy estimates.
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Minh DD
The Journal of chemical physics 130(20):204102, 2009 May 28 - Who cited this? | PubMed ID: 19485432 | Fulltext
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Path integral analysis of Jarzynski's equality: analytical results.
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Minh DD and Adib AB
Physical review. E, Statistical, nonlinear, and soft matter physics 79(2 Pt 1):021122, 2009 Feb - Who cited this? | PubMed ID: 19391721 | Fulltext
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Springs and speeds in free energy reconstruction from irreversible single-molecule pulling experiments.
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Minh DD and McCammon JA
The journal of physical chemistry. B 112(19):5892, 2008 May 15 - Who cited this? | PubMed ID: 18088108 | Fulltext
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Optimized free energies from bidirectional single-molecule force spectroscopy.
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Minh DD and Adib AB
Physical review letters 100(18):180602, 2008 May 9 - Who cited this? | PubMed ID: 18518359 | Fulltext
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Molecular crowding inhibits intramolecular breathing motions in proteins.
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Makowski L, Rodi DJ, Mandava S, Minh DD, Gore DB, and Fischetti RF
Journal of molecular biology 375(2):529-46, 2008 Jan 11 - Who cited this? | PubMed ID: 18031757 | Fulltext
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Accelerated entropy estimates with accelerated dynamics.
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Minh DD, Hamelberg D, and McCammon JA
The Journal of chemical physics 127(15):154105, 2007 Oct 21 - Who cited this? | PubMed ID: 17949130 | Fulltext
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Remarkable loop flexibility in avian influenza N1 and its implications for antiviral drug design.
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Amaro RE, Minh DD, Cheng LS, Lindstrom WM, Olson AJ, Lin JH, Li WW, and McCammon JA
Journal of the American Chemical Society 129(25):7764-5, 2007 Jun 27 - Who cited this? | PubMed ID: 17539643 | Fulltext
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Multidimensional potentials of mean force from biased experiments along a single coordinate.
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Minh DD
The journal of physical chemistry. B 111(16):4137-40, 2007 Apr 26 - Who cited this? | PubMed ID: 17407342 | Fulltext
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Free-energy reconstruction from experiments performed under different biasing programs.
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Minh DD
Physical review. E, Statistical, nonlinear, and soft matter physics 74(6 Pt 1):061120, 2006 Dec - Who cited this? | PubMed ID: 17280051 | Fulltext
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The influence of macromolecular crowding on HIV-1 protease internal dynamics.
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Minh DD, Chang CE, Trylska J, Tozzini V, and McCammon JA
Journal of the American Chemical Society 128(18):6006-7, 2006 May 10 - Who cited this? | PubMed ID: 16669648 | Fulltext
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The entropic cost of protein-protein association: a case study on acetylcholinesterase binding to fasciculin-2.
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Minh DD, Bui JM, Chang CE, Jain T, Swanson JM, and McCammon JA
Biophysical journal 89(4):L25-7, 2005 Oct - Who cited this? | PubMed ID: 16100267 | Fulltext
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