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Papers authored by Makowski L

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A rapid coarse residue-based computational method for x-ray solution scattering characterization of protein folds and multiple conformational states of large protein complexes.

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Yang S, Park S, Makowski L, and Roux B

Biophysical journal 96(11):4449-63, 2009 Jun 3 - Who cited this? | PubMed ID: 19486669 | Fulltext

Simulated x-ray scattering of protein solutions using explicit-solvent models.

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Park S, Bardhan JP, Roux B, and Makowski L

The Journal of chemical physics 130(13):134114, 2009 Apr 7 - Who cited this? | PubMed ID: 19355724 | Fulltext

Characterization of Protein Fold by Wide-Angle X-ray Solution Scattering.

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Makowski L, Rodi DJ, Mandava S, Devarapalli S, and Fischetti RF

Journal of molecular biology 383(3):731-44, 2008 Nov 14 - Who cited this? | PubMed ID: 18786543 | Fulltext

Metabolic profiling of PPAR{alpha}-/- mice reveals defects in carnitine and amino acid homeostasis that are partially reversed by oral carnitine supplementation.

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Makowski L, Noland RC, Koves TR, Xing W, Ilkayeva OR, Muehlbauer MJ, Stevens RD, and Muoio DM

The FASEB journal : official publication of the Federation of American Societies for Experimental Biology, 2008 Oct 22 - Who cited this? | PubMed ID: 18945875 | Fulltext

Role of LKB1 in lung cancer development.

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Makowski L and Hayes DN

British journal of cancer 99(5):683-8, 2008 Sep 2 - Who cited this? | PubMed ID: 18728656 | Fulltext

Molecular crowding inhibits intramolecular breathing motions in proteins.

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Makowski L, Rodi DJ, Mandava S, Minh DD, Gore DB, and Fischetti RF

Journal of molecular biology 375(2):529-46, 2008 Jan 11 - Who cited this? | PubMed ID: 18031757 | Fulltext

Detection of functional ligand-binding events using synchrotron x-ray scattering.

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Rodi DJ, Mandava S, Gore DB, Makowski L, and Fischetti RF

Journal of biomolecular screening : the official journal of the Society for Biomolecular Screening 12(7):994-8, 2007 Oct - Who cited this? | PubMed ID: 17942792 | Fulltext

Treatment of diabetes and atherosclerosis by inhibiting fatty-acid-binding protein aP2.

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Furuhashi M, Tuncman G, Görgün CZ, Makowski L, Atsumi G, Vaillancourt E, Kono K, Babaev VR, Fazio S, Linton MF, Sulsky R, Robl JA, Parker RA, and Hotamisligil GS

Nature 447(7147):959-65, 2007 Jun 21 - Who cited this? | PubMed ID: 17554340 | Fulltext

Trinucleotide cassettes increase diversity of T7 phage-displayed peptide library.

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Krumpe LR, Schumacher KM, McMahon JB, Makowski L, and Mori T

BMC biotechnology 7:65, 2007 - Who cited this? | PubMed ID: 17919322 | Fulltext

Deposition of fractal-like aerosol aggregates in a model of human nasal cavity.

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Moskal A, Makowski L, Sosnowski TR, and Gradoń L

Inhalation toxicology 18(10):725-31, 2006 Sep - Who cited this? | PubMed ID: 16774861 | Fulltext

T7 lytic phage-displayed peptide libraries exhibit less sequence bias than M13 filamentous phage-displayed peptide libraries.

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Krumpe LR, Atkinson AJ, Smythers GW, Kandel A, Schumacher KM, McMahon JB, Makowski L, and Mori T

Proteomics 6(15):4210-22, 2006 Aug - Who cited this? | PubMed ID: 16819727 | Fulltext

Subtractive transcriptomics: establishing polarity drives in vitro human endothelial morphogenesis.

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Glesne DA, Zhang W, Mandava S, Ursos L, Buell ME, Makowski L, and Rodi DJ

Cancer research 66(8):4030, 2006 Apr 15 - Who cited this? | PubMed ID: 16618722 | Fulltext

Myeloid lineage cell-restricted insulin resistance protects apolipoproteinE-deficient mice against atherosclerosis.

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Baumgartl J, Baudler S, Scherner M, Babaev V, Makowski L, Suttles J, McDuffie M, Tobe K, Kadowaki T, Fazio S, Kahn CR, Hotamisligil GS, Krone W, Linton M, and Brüning JC

Cell metabolism 3(4):247, 2006 Apr - Who cited this? | PubMed ID: 16581002 | Fulltext

Phage display reveals multiple contact sites between FhuA, an outer membrane receptor of Escherichia coli, and TonB.

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Carter DM, Gagnon JN, Damlaj M, Mandava S, Makowski L, Rodi DJ, Pawelek PD, and Coulton JW

Journal of molecular biology 357(1):236-51, 2006 Mar 17 - Who cited this? | PubMed ID: 16414071 | Fulltext

The role of fatty acid binding proteins in metabolic syndrome and atherosclerosis.

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Makowski L and Hotamisligil GS

Current opinion in lipidology 16(5):543-8, 2005 Oct - Who cited this? | PubMed ID: 16148539 | Fulltext

The fatty acid-binding protein, aP2, coordinates macrophage cholesterol trafficking and inflammatory activity. Macrophage expression of aP2 impacts peroxisome proliferator-activated receptor gamma and IkappaB kinase activities.

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Makowski L, Brittingham KC, Reynolds JM, Suttles J, and Hotamisligil GS

The Journal of biological chemistry 280(13):12888-95, 2005 Apr 1 - Who cited this? | PubMed ID: 15684432 | Fulltext

DIVAA: analysis of amino acid diversity in multiple aligned protein sequences.

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Rodi DJ, Mandava S, and Makowski L

Bioinformatics (Oxford, England) 20(18):3481, 2004 Dec 12 - Who cited this? | PubMed ID: 15284106 | Fulltext

Wide-angle X-ray solution scattering as a probe of ligand-induced conformational changes in proteins.

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Fischetti RF, Rodi DJ, Gore DB, and Makowski L

Chemistry & biology 11(10):1431-43, 2004 Oct - Who cited this? | PubMed ID: 15489170 | Fulltext

Combined adipocyte-macrophage fatty acid-binding protein deficiency improves metabolism, atherosclerosis, and survival in apolipoprotein E-deficient mice.

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Boord JB, Maeda K, Makowski L, Babaev VR, Fazio S, Linton MF, and Hotamisligil GS

Circulation 110(11):1492-8, 2004 Sep 14 - Who cited this? | PubMed ID: 15353487 | Fulltext

Fatty acid binding proteins--the evolutionary crossroads of inflammatory and metabolic responses.

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Makowski L and Hotamisligil GS

The Journal of nutrition 134(9):2464S-2468S, 2004 Sep - Who cited this? | PubMed ID: 15333743 | Fulltext

RELIC--a bioinformatics server for combinatorial peptide analysis and identification of protein-ligand interaction sites.

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Mandava S, Makowski L, Devarapalli S, Uzubell J, and Rodi DJ

Proteomics 4(5):1439-60, 2004 May - Who cited this? | PubMed ID: 15188413 | Fulltext

Genome-wide characterisation of the binding repertoire of small molecule drugs.

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Makowski L and Rodi DJ

Human genomics 1(1):41-51, 2003 Nov - Who cited this? | PubMed ID: 15601532 | Fulltext

High-resolution wide-angle X-ray scattering of protein solutions: effect of beam dose on protein integrity.

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Fischetti RF, Rodi DJ, Mirza A, Irving TC, Kondrashkina E, and Makowski L

Journal of synchrotron radiation 10(Pt 5):398-404, 2003 Sep 1 - Who cited this? | PubMed ID: 12944630 | Fulltext

Estimating the diversity of peptide populations from limited sequence data.

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Makowski L and Soares A

Bioinformatics (Oxford, England) 19(4):483-9, 2003 Mar 1 - Who cited this? | PubMed ID: 12611803 | Fulltext

Role of the fatty acid binding protein mal1 in obesity and insulin resistance.

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Maeda K, Uysal KT, Makowski L, Görgün CZ, Atsumi G, Parker RA, Brüning J, Hertzel AV, Bernlohr DA, and Hotamisligil GS

Diabetes 52(2):300-7, 2003 Feb - Who cited this? | PubMed ID: 12540600 | Fulltext

Quantitative assessment of peptide sequence diversity in M13 combinatorial peptide phage display libraries.

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Rodi DJ, Soares AS, and Makowski L

Journal of molecular biology 322(5):1039-52, 2002 Oct 4 - Who cited this? | PubMed ID: 12367527 | Fulltext

Adipocyte fatty acid-binding protein, aP2, alters late atherosclerotic lesion formation in severe hypercholesterolemia.

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Boord JB, Maeda K, Makowski L, Babaev VR, Fazio S, Linton MF, and Hotamisligil GS

Arteriosclerosis, thrombosis, and vascular biology 22(10):1686-91, 2002 Oct 1 - Who cited this? | PubMed ID: 12377750 | Fulltext

One from column A and two from column B: the benefits of phage display in molecular-recognition studies.

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Rodi DJ, Makowski L, and Kay BK

Current opinion in chemical biology 6(1):92-6, 2002 Feb - Who cited this? | PubMed ID: 11827830 | Fulltext

Identification of small molecule binding sites within proteins using phage display technology.

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Rodi DJ, Agoston GE, Manon R, Lapcevich R, Green SJ, and Makowski L

Combinatorial chemistry & high throughput screening 4(7):553-72, 2001 Nov - Who cited this? | PubMed ID: 11562259 | Fulltext

Lack of macrophage fatty-acid-binding protein aP2 protects mice deficient in apolipoprotein E against atherosclerosis.

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Makowski L, Boord JB, Maeda K, Babaev VR, Uysal KT, Morgan MA, Parker RA, Suttles J, Fazio S, Hotamisligil GS, and Linton MF

Nature medicine 7(6):699-705, 2001 Jun - Who cited this? | PubMed ID: 11385507 | Fulltext

Lipoprotein profiles, not anthropometric measures, correlate with serum lipoprotein(a) values in children: the Taipei children heart study.

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Chu NF, Makowski L, Chang JB, Wang DJ, Liou SH, and Shieh SM

European journal of epidemiology 16(1):5-12, 2000 Jan - Who cited this? | PubMed ID: 10780336 | Fulltext

Altered insulin secretion associated with reduced lipolytic efficiency in aP2-/- mice.

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Scheja L, Makowski L, Uysal KT, Wiesbrock SM, Shimshek DR, Meyers DS, Morgan M, Parker RA, and Hotamisligil GS

Diabetes 48(10):1987-94, 1999 Oct - Who cited this? | PubMed ID: 10512363 | Fulltext

Phage-display technology--finding a needle in a vast molecular haystack.

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Rodi DJ and Makowski L

Current opinion in biotechnology 10(1):87-93, 1999 Feb - Who cited this? | PubMed ID: 10047512 | Fulltext

Stability of human plasma leptin concentrations within 36 hours following specimen collection.

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Chu NF, Makowski L, Hotamisligil GS, and Rimm EB

Clinical biochemistry 32(1):87-9, 1999 Feb - Who cited this? | PubMed ID: 10074899 | Fulltext

Screening of a library of phage-displayed peptides identifies human bcl-2 as a taxol-binding protein.

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Rodi DJ, Janes RW, Sanganee HJ, Holton RA, Wallace BA, and Makowski L

Journal of molecular biology 285(1):197-203, 1999 Jan 8 - Who cited this? | PubMed ID: 9878399 | Fulltext

Similarity between the sequences of taxol-selected peptides and the disordered loop of the anti-apoptotic protein, Bcl-2.

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Rodi DJ and Makowski L

Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing:532-41, 1999 - Who cited this? | PubMed ID: 10380225 | Fulltext

Electron microscopy and x-ray diffraction studies of Lotus tetragonolobus A isolectin cross-linked with a divalent Lewisx oligosaccharide, an oncofetal antigen.

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Cheng W, Bullitt E, Bhattacharyya L, Brewer CF, and Makowski L

The Journal of biological chemistry 273(52):35016-22, 1998 Dec 25 - Who cited this? | PubMed ID: 9857034 | Fulltext

Don Caspar, TMV, and protein-protein interactions.

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Makowski L

Proteins 30(2):109-12, 1998 Feb 1 - Who cited this? | PubMed ID: 9489919 | Fulltext

An unreasonable man in a quasi-equivalent world.

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Makowski L

Biophysical journal 74(1):534-6, 1998 Jan - Who cited this? | PubMed ID: 9449353 | Fulltext

Bacterial adhesion pili are heterologous assemblies of similar subunits.

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Bullitt E and Makowski L

Biophysical journal 74(1):623-32, 1998 Jan - Who cited this? | PubMed ID: 9449363 | Fulltext

Analysis of the stability of hemoglobin S double strands.

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Mu XQ, Makowski L, and Magdoff-Fairchild B

Biophysical journal 74(1):655-68, 1998 Jan - Who cited this? | PubMed ID: 9449367 | Fulltext

Shuffling of structural elements in filamentous bacteriophages.

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Kishchenko G and Makowski L

Proteins 27(3):405-9, 1997 Mar - Who cited this? | PubMed ID: 9094742 | Fulltext

X-ray diffraction from a helix of any length that displays cumulative azimuthal disorder.

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Mu XQ, Makowski L, and Fairchild BM

Acta crystallographica. Section A, Foundations of crystallography 53 ( Pt 1):55-62, 1997 Jan 1 - Who cited this? | PubMed ID: 9037747 | Fulltext

Development of pilus organelle subassemblies in vitro depends on chaperone uncapping of a beta zipper.

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Bullitt E, Jones CH, Striker R, Soto G, Jacob-Dubuisson F, Pinkner J, Wick MJ, Makowski L, and Hultgren SJ

Proceedings of the National Academy of Sciences of the United States of America 93(23):12890-5, 1996 Nov 12 - Who cited this? | PubMed ID: 8917515 | Fulltext

Electron crystallography. Taxol found on tubulin.

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Makowski L

Nature 375(6530):361-2, 1995 Jun 1 - Who cited this? | PubMed ID: 7760927 | Fulltext

Methane-induced haemolysis of human erythrocytes.

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Batliwala H, Somasundaram T, Uzgiris EE, and Makowski L

The Biochemical journal 307 ( Pt 2):433-8, 1995 Apr 15 - Who cited this? | PubMed ID: 7733880 | Fulltext

Structural polymorphism of bacterial adhesion pili.

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Bullitt E and Makowski L

Nature 373(6510):164-7, 1995 Jan 12 - Who cited this? | PubMed ID: 7816100 | Fulltext

Structure of a foreign peptide displayed on the surface of bacteriophage M13.

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Kishchenko G, Batliwala H, and Makowski L

Journal of molecular biology 241(2):208-13, 1994 Aug 12 - Who cited this? | PubMed ID: 8057360 | Fulltext

Structural constraints on the display of foreign peptides on filamentous bacteriophages.

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Makowski L

Gene 128(1):5-11, 1993 Jun 15 - Who cited this? | PubMed ID: 8508959 | Fulltext

Construction of a microphage variant of filamentous bacteriophage.

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Specthrie L, Bullitt E, Horiuchi K, Model P, Russel M, and Makowski L

Journal of molecular biology 228(3):720-4, 1992 Dec 5 - Who cited this? | PubMed ID: 1469710 | Fulltext

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