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Papers authored by Liu DR

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An in vitro translation, selection and amplification system for peptide nucleic acids.

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Brudno Y, Birnbaum ME, Kleiner RE, and Liu DR

Nature chemical biology 6(2):148-55, 2010 Feb - Who cited this? | PubMed ID: 20081830 | Fulltext

The behaviour of 5-hydroxymethylcytosine in bisulfite sequencing.

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Huang Y, Pastor WA, Shen Y, Tahiliani M, Liu DR, and Rao A

PLoS ONE 5(1):e8888, 2010 - Who cited this? | PubMed ID: 20126651 | Fulltext

Photoswitching mechanism of cyanine dyes.

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Dempsey GT, Bates M, Kowtoniuk WE, Liu DR, Tsien RY, and Zhuang X

Journal of the American Chemical Society 131(51):18192-3, 2009 Dec 30 - Who cited this? | PubMed ID: 19961226 | Fulltext

[The cryosurgery of central lung cancer by rigid bronchoscopy.].

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Tian YC, Liu DR, Guo YQ, Zhang ZR, Wang ZY, Chen JY, and Ge BS

Zhonghua wai ke za zhi [Chinese journal of surgery] 47(24):1876-8, 2009 Dec 15 - Who cited this? | PubMed ID: 20193406 | Fulltext

LC/MS analysis of cellular RNA reveals NAD-linked RNA.

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Chen YG, Kowtoniuk WE, Agarwal I, Shen Y, and Liu DR

Nature chemical biology 5(12):879-81, 2009 Dec - Who cited this? | PubMed ID: 19820715 | Fulltext

A small-molecule inhibitor of tgf-Beta signaling replaces sox2 in reprogramming by inducing nanog.

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Ichida JK, Blanchard J, Lam K, Son EY, Chung JE, Egli D, Loh KM, Carter AC, Di Giorgio FP, Koszka K, Huangfu D, Akutsu H, Liu DR, Rubin LL, and Eggan K

Cell stem cell 5(5):491-503, 2009 Nov 6 - Who cited this? | PubMed ID: 19818703 | Fulltext

[On the academic value of Wutingzisujiebashiyinanjing (Wutingzi's Vernacular Explanation of Nanjing).].

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Deng YE, Peng RH, and Liu DR

Zhonghua yi shi za zhi (Beijing, China : 1980) 39(6):367-70, 2009 Nov - Who cited this? | PubMed ID: 20193448 | Fulltext

Templated Synthesis of Peptide Nucleic Acids via Sequence-Selective Base-Filling Reactions.

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Heemstra JM and Liu DR

Journal of the American Chemical Society 131(32):11347-9, 2009 Aug 19 - Who cited this? | PubMed ID: 19722647 | Fulltext

[Prognostic analysis of N2 non-small cell lung cancer.].

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Ma QL, Liu DR, Guo YQ, Shi B, Song ZY, and Tian YC

Zhonghua wai ke za zhi [Chinese journal of surgery] 47(14):1058-60, 2009 Jul 15 - Who cited this? | PubMed ID: 19781268 | Fulltext

Reactivity-Dependent PCR: Direct, Solution-Phase in Vitro Selection for Bond Formation.

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Gorin DJ, Kamlet AS, and Liu DR

Journal of the American Chemical Society 131(26):9189-91, 2009 Jul 8 - Who cited this? | PubMed ID: 19522494 | Fulltext

Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1.

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Tahiliani M, Koh KP, Shen Y, Pastor WA, Bandukwala H, Brudno Y, Agarwal S, Iyer LM, Liu DR, Aravind L, and Rao A

Science (New York, N.Y.) 324(5929):930-5, 2009 May 15 - Who cited this? | PubMed ID: 19372391 | Fulltext

A chemical screen for biological small molecule-RNA conjugates reveals CoA-linked RNA.

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Kowtoniuk WE, Shen Y, Heemstra JM, Agarwal I, and Liu DR

Proceedings of the National Academy of Sciences of the United States of America 106(19):7768-73, 2009 May 12 - Who cited this? | PubMed ID: 19416889 | Fulltext

[Observation on therapeutic effect of acupuncture on stroke by "Najia method of Ziwu Liuzhu"].

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Liu DR, Hao SF, and Liu ZY

Zhongguo zhen jiu = Chinese acupuncture & moxibustion 29(5):353-6, 2009 May - Who cited this? | PubMed ID: 19489489 | Fulltext

Mammalian cell penetration, siRNA transfection, and DNA transfection by supercharged proteins.

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McNaughton BR, Cronican JJ, Thompson DB, and Liu DR

Proceedings of the National Academy of Sciences of the United States of America 106(15):6111-6, 2009 Apr 14 - Who cited this? | PubMed ID: 19307578 | Fulltext

Recent progress toward the templated synthesis and directed evolution of sequence-defined synthetic polymers.

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Brudno Y and Liu DR

Chemistry & biology 16(3):265-76, 2009 Mar 27 - Who cited this? | PubMed ID: 19318208 | Fulltext

Translation of DNA into a library of 13 000 synthetic small-molecule macrocycles suitable for in vitro selection.

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Tse BN, Snyder TM, Shen Y, and Liu DR

Journal of the American Chemical Society 130(46):15611-26, 2008 Nov 19 - Who cited this? | PubMed ID: 18956864 | Fulltext

DNA-templated polymerization of side-chain-functionalized peptide nucleic acid aldehydes.

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Kleiner RE, Brudno Y, Birnbaum ME, and Liu DR

Journal of the American Chemical Society 130(14):4646, 2008 Apr 9 - Who cited this? | PubMed ID: 18341334 | Fulltext

Effects of template sequence and secondary structure on DNA-templated reactivity.

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Snyder TM, Tse BN, and Liu DR

Journal of the American Chemical Society 130(4):1392, 2008 Jan 30 - Who cited this? | PubMed ID: 18179216 | Fulltext

Development and initial application of a hybridization-independent, DNA-encoded reaction discovery system compatible with organic solvents.

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Rozenman MM, Kanan MW, and Liu DR

Journal of the American Chemical Society 129(48):14933, 2007 Dec 5 - Who cited this? | PubMed ID: 17994738 | Fulltext

Dissecting protein structure and function using directed evolution.

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Yuen CM and Liu DR

Nature methods 4(12):995, 2007 Dec - Who cited this? | PubMed ID: 18049466 | Fulltext

[Results of myasthenia gravis treated with thymectomy.].

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Zhang HT, Liu DR, Guo YQ, Ge BS, Tian YC, Shi B, and Liang CY

Zhonghua wai ke za zhi [Chinese journal of surgery] 45(22):1546-8, 2007 Nov 15 - Who cited this? | PubMed ID: 18282392 | Fulltext

[Exploration of talent training on emergency response system in China.].

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Wang CJ, Xiang H, and Liu DR

Zhonghua yi xue za zhi 87(35):2455-7, 2007 Sep 18 - Who cited this? | PubMed ID: 18067803 | Fulltext

Supercharging proteins can impart unusual resilience.

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Lawrence MS, Phillips KJ, and Liu DR

Journal of the American Chemical Society 129(33):10110, 2007 Aug 22 - Who cited this? | PubMed ID: 17665911 | Fulltext

Directed evolution can rapidly improve the activity of chimeric assembly-line enzymes.

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Fischbach MA, Lai JR, Roche ED, Walsh CT, and Liu DR

Proceedings of the National Academy of Sciences of the United States of America 104(29):11951, 2007 Jul 17 - Who cited this? | PubMed ID: 17620609 | Fulltext

Solving chemical problems through the application of evolutionary principles.

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Rozenman MM, McNaughton BR, and Liu DR

Current opinion in chemical biology 11(3):259, 2007 Jun - Who cited this? | PubMed ID: 17548235 | Fulltext

Synthesis of acyclic alpha,beta-unsaturated ketones via Pd(II)-catalyzed intermolecular reaction of alkynamides and alkenes.

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Momiyama N, Kanan MW, and Liu DR

Journal of the American Chemical Society 129(8):2230, 2007 Feb 28 - Who cited this? | PubMed ID: 17279758 | Fulltext

Study progress in therapeutic effects of traditional Chinese medicine monomer in severe acute pancreatitis.

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Zhang XP, Liu DR, and Shi Y

Journal of Zhejiang University. Science. B 8(2):147-52, 2007 Feb - Who cited this? | PubMed ID: 17266191 | Fulltext

Identification of eukaryotic promoter regulatory elements using nonhomologous random recombination.

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Doyon JB and Liu DR

Nucleic acids research 35(17):5851, 2007 - Who cited this? | PubMed ID: 17720707 | Fulltext

Discovery of a mRNA mitochondrial localization element in Saccharomyces cerevisiae by nonhomologous random recombination and in vivo selection.

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Liu JM and Liu DR

Nucleic acids research 35(20):6750, 2007 - Who cited this? | PubMed ID: 17916575 | Fulltext

In vivo evolution of an RNA-based transcriptional silencing domain in S. cerevisiae.

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Kehayova PD and Liu DR

Chemistry & biology 14(1):65, 2007 Jan - Who cited this? | PubMed ID: 17254953 | Fulltext

Progress in research into the mechanism of Radix salviae miltiorrhizae in treatment of acute pancreatitis.

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Zhang XP, Li ZJ, and Liu DR

Hepatobiliary & pancreatic diseases international : HBPD INT 5(4):501-4, 2006 Nov - Who cited this? | PubMed ID: 17085332 | Fulltext

The pathogen-associated iroA gene cluster mediates bacterial evasion of lipocalin 2.

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Fischbach MA, Lin H, Zhou L, Yu Y, Abergel RJ, Liu DR, Raymond KN, Wanner BL, Strong RK, Walsh CT, Aderem A, and Smith KD

Proceedings of the National Academy of Sciences of the United States of America 103(44):16502, 2006 Oct 31 - Who cited this? | PubMed ID: 17060628 | Fulltext

Binding and stability determinants of the PPARgamma nuclear receptor-coactivator interface as revealed by shotgun alanine scanning and in vivo selection.

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Phillips KJ, Rosenbaum DM, and Liu DR

Journal of the American Chemical Society 128(34):11298, 2006 Aug 30 - Who cited this? | PubMed ID: 16925449 | Fulltext

Localized protein interaction surfaces on the EntB carrier protein revealed by combinatorial mutagenesis and selection.

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Lai JR, Fischbach MA, Liu DR, and Walsh CT

Journal of the American Chemical Society 128(34):11002, 2006 Aug 30 - Who cited this? | PubMed ID: 16925399 | Fulltext

Bromoenterobactins as potent inhibitors of a pathogen-associated, siderophore-modifying C-glycosyltransferase.

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Lin H, Fischbach MA, Gatto GJ, Liu DR, and Walsh CT

Journal of the American Chemical Society 128(29):9324, 2006 Jul 26 - Who cited this? | PubMed ID: 16848455 | Fulltext

Control of transcription factor activity and osteoblast differentiation in mammalian cells using an evolved small-molecule-dependent intein.

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Yuen CM, Rodda SJ, Vokes SA, McMahon AP, and Liu DR

Journal of the American Chemical Society 128(27):8939, 2006 Jul 12 - Who cited this? | PubMed ID: 16819890 | Fulltext

A protein interaction surface in nonribosomal peptide synthesis mapped by combinatorial mutagenesis and selection.

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Lai JR, Fischbach MA, Liu DR, and Walsh CT

Proceedings of the National Academy of Sciences of the United States of America 103(14):5314, 2006 Apr 4 - Who cited this? | PubMed ID: 16567620 | Fulltext

How pathogenic bacteria evade mammalian sabotage in the battle for iron.

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Fischbach MA, Lin H, Liu DR, and Walsh CT

Nature chemical biology 2(3):132, 2006 Mar - Who cited this? | PubMed ID: 16485005 | Fulltext

Directed evolution and substrate specificity profile of homing endonuclease I-SceI.

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Doyon JB, Pattanayak V, Meyer CB, and Liu DR

Journal of the American Chemical Society 128(7):2477, 2006 Feb 22 - Who cited this? | PubMed ID: 16478204 | Fulltext

Enzymatic tailoring of enterobactin alters membrane partitioning and iron acquisition.

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Luo M, Lin H, Fischbach MA, Liu DR, Walsh CT, and Groves JT

ACS chemical biology 1(1):29, 2006 Feb 17 - Who cited this? | PubMed ID: 17163637 | Fulltext

DNA-templated synthesis in organic solvents.

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Rozenman MM and Liu DR

Chembiochem : a European journal of chemical biology 7(2):253, 2006 Feb - Who cited this? | PubMed ID: 16381048 | Fulltext

Small-molecule diversification from iterated branching reaction pathways enabled by DNA-templated synthesis.

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Calderone CT and Liu DR

Angewandte Chemie (International ed. in English) 44(45):7383, 2005 Dec 1 - Who cited this? | PubMed ID: 16240310 | Fulltext

Ordered multistep synthesis in a single solution directed by DNA templates.

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Snyder TM and Liu DR

Angewandte Chemie (International ed. in English) 44(45):7379, 2005 Dec 1 - Who cited this? | PubMed ID: 16217825 | Fulltext

In vitro characterization of salmochelin and enterobactin trilactone hydrolases IroD, IroE, and Fes.

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Lin H, Fischbach MA, Liu DR, and Walsh CT

Journal of the American Chemical Society 127(31):11075, 2005 Aug 10 - Who cited this? | PubMed ID: 16076215 | Fulltext

Functional dissection of sRNA translational regulators by nonhomologous random recombination and in vivo selection.

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Liu JM, Bittker JA, Lonshteyn M, and Liu DR

Chemistry & biology 12(7):757, 2005 Jul - Who cited this? | PubMed ID: 16039523 | Fulltext

DNA-templated functional group transformations enable sequence-programmed synthesis using small-molecule reagents.

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Sakurai K, Snyder TM, and Liu DR

Journal of the American Chemical Society 127(6):1660, 2005 Feb 16 - Who cited this? | PubMed ID: 15700999 | Fulltext

Creating small-molecule-dependent switches to modulate biological functions.

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Buskirk AR and Liu DR

Chemistry & biology 12(2):151-61, 2005 Feb - Who cited this? | PubMed ID: 15734643 | Fulltext

In vitro characterization of IroB, a pathogen-associated C-glycosyltransferase.

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Fischbach MA, Lin H, Liu DR, and Walsh CT

Proceedings of the National Academy of Sciences of the United States of America 102(3):571, 2005 Jan 18 - Who cited this? | PubMed ID: 15598734 | Fulltext

Nucleic-acid-templated synthesis as a model system for ancient translation.

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Calderone CT and Liu DR

Current opinion in chemical biology 8(6):645, 2004 Dec - Who cited this? | PubMed ID: 15556410 | Fulltext

Reaction discovery enabled by DNA-templated synthesis and in vitro selection.

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Kanan MW, Rozenman MM, Sakurai K, Snyder TM, and Liu DR

Nature 431(7008):545, 2004 Sep 30 - Who cited this? | PubMed ID: 15457254 | Fulltext

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