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Papers authored by Kessler BM

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Ubiquitin ligase ARF-BP1/Mule modulates base excision repair.

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Parsons JL, Tait PS, Finch D, Dianova II, Edelmann MJ, Khoronenkova SV, Kessler BM, Sharma RA, McKenna WG, and Dianov GL

The EMBO journal 28(20):3207-15, 2009 Oct 21 - Who cited this? | PubMed ID: 19713937 | Fulltext

Comparison of CID Versus ETD Based MS/MS Fragmentation for the Analysis of Protein Ubiquitination.

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Sobott F, Watt SJ, Smith J, Edelmann MJ, Kramer HB, and Kessler BM

Journal of the American Society for Mass Spectrometry 20(9):1652-9, 2009 Sep - Who cited this? | PubMed ID: 19523847 | Fulltext

Novel MMP-9 Substrates in Cancer Cells Revealed by a Label-free Quantitative Proteomics Approach.

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Xu D, Suenaga N, Edelmann MJ, Fridman R, Muschel RJ, and Kessler BM

Molecular & cellular proteomics : MCP 7(11):2215-28, 2008 Nov - Who cited this? | PubMed ID: 18596065 | Fulltext

Structural basis and specificity of human otubain 1 mediated deubiquitylation.

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Edelmann MJ, Iphoefer A, Akutsu M, Altun M, di Gleria K, Kramer HB, Fiebiger E, Dhe-Paganon S, and Kessler BM

The Biochemical journal, 2008 Oct 27 - Who cited this? | PubMed ID: 18954305 | Fulltext

Proteomic-based identification of novel factor inhibiting HIF (FIH) substrates indicates widespread asparaginyl hydroxylation of ankyrin repeat domain-containing proteins.

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Cockman ME, Webb JD, Kramer HB, Kessler BM, and Ratcliffe PJ

Molecular & cellular proteomics : MCP, 2008 Oct 20 - Who cited this? | PubMed ID: 18936059 | Fulltext

Ubiquitin and ubiquitin-like specific proteases targeted by infectious pathogens: Emerging patterns and molecular principles.

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Edelmann MJ and Kessler BM

Biochimica et biophysica acta, 2008 Sep 10 - Who cited this? | PubMed ID: 18817868 | Fulltext

Odin (ANKS1A) is a Src family kinase target in colorectal cancer cells.

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Emaduddin M, Edelmann MJ, Kessler BM, and Feller SM

Cell communication and signaling : CCS 6:7, 2008 - Who cited this? | PubMed ID: 18844995 | Fulltext

Proteome changes induced by knock-down of the deubiquitylating enzyme HAUSP/USP7.

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Kessler BM, Fortunati E, Melis M, Pals CE, Clevers H, and Maurice MM

Journal of proteome research 6(11):4163-72, 2007 Nov - Who cited this? | PubMed ID: 17927229 | Fulltext

Probing nanoscale solids at thermal extremes.

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Begtrup GE, Ray KG, Kessler BM, Yuzvinsky TD, Garcia H, and Zettl A

Physical review letters 99(15):155901, 2007 Oct 12 - Who cited this? | PubMed ID: 17995185 | Fulltext

Asparaginyl hydroxylation of the Notch ankyrin repeat domain by factor inhibiting hypoxia-inducible factor.

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Coleman ML, McDonough MA, Hewitson KS, Coles C, Mecinovic J, Edelmann M, Cook KM, Cockman ME, Lancaster DE, Kessler BM, Oldham NJ, Ratcliffe PJ, and Schofield CJ

The Journal of biological chemistry 282(33):24027, 2007 Aug 17 - Who cited this? | PubMed ID: 17573339 | Fulltext

Iron load and redox stress in skeletal muscle of aged rats.

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Altun M, Edström E, Spooner E, Flores-Moralez A, Bergman E, Tollet-Egnell P, Norstedt G, Kessler BM, and Ulfhake B

Muscle & nerve 36(2):223-33, 2007 Aug - Who cited this? | PubMed ID: 17503500 | Fulltext

A cell-permeable inhibitor and activity-based probe for the caspase-like activity of the proteasome.

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van Swieten PF, Samuel E, Hernández RO, van den Nieuwendijk AM, Leeuwenburgh MA, van der Marel GA, Kessler BM, Overkleeft HS, and Kisselev AF

Bioorganic & medicinal chemistry letters 17(12):3402, 2007 Jun 15 - Who cited this? | PubMed ID: 17442566 | Fulltext

Putting proteomics on target: activity-based profiling of ubiquitin and ubiquitin-like processing enzymes.

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Kessler BM

Expert review of proteomics 3(2):213-21, 2006 Apr - Who cited this? | PubMed ID: 16608434 | Fulltext

Ultra-fast tandem mass spectrometry scanning combined with monolithic column liquid chromatography increases throughput in proteomic analysis.

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Batycka M, Inglis NF, Cook K, Adam A, Fraser-Pitt D, Smith DG, Main L, Lubben A, and Kessler BM

Rapid communications in mass spectrometry : RCM 20(14):2074-80, 2006 - Who cited this? | PubMed ID: 16773668 | Fulltext

Effects of PS-341 on the activity and composition of proteasomes in multiple myeloma cells.

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Altun M, Galardy PJ, Shringarpure R, Hideshima T, LeBlanc R, Anderson KC, Ploegh HL, and Kessler BM

Cancer research 65(17):7896-901, 2005 Sep 1 - Who cited this? | PubMed ID: 16140960 | Fulltext

A deubiquitinating enzyme encoded by HSV-1 belongs to a family of cysteine proteases that is conserved across the family Herpesviridae.

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Kattenhorn LM, Korbel GA, Kessler BM, Spooner E, and Ploegh HL

Molecular cell 19(4):547, 2005 Aug 19 - Who cited this? | PubMed ID: 16109378 | Fulltext

Activity probe for in vivo profiling of the specificity of proteasome inhibitor bortezomib.

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Berkers CR, Verdoes M, Lichtman E, Fiebiger E, Kessler BM, Anderson KC, Ploegh HL, Ovaa H, and Galardy PJ

Nature methods 2(5):357, 2005 May - Who cited this? | PubMed ID: 15846363 | Fulltext

Small-molecule inhibitors and probes for ubiquitin- and ubiquitin-like-specific proteases.

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Borodovsky A, Ovaa H, Meester WJ, Venanzi ES, Bogyo MS, Hekking BG, Ploegh HL, Kessler BM, and Overkleeft HS

Chembiochem : a European journal of chemical biology 6(2):287-91, 2005 Feb - Who cited this? | PubMed ID: 15651044 | Fulltext

Bioorthogonal organic chemistry in living cells: novel strategies for labeling biomolecules.

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van Swieten PF, Leeuwenburgh MA, Kessler BM, and Overkleeft HS

Organic & biomolecular chemistry 3(1):20-7, 2005 Jan 7 - Who cited this? | PubMed ID: 15602593 | Fulltext

Effects of proteasome inhibitors MG132, ZL3VS and AdaAhx3L3VS on protein metabolism in septic rats.

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Kadlcíková J, Holecek M, Safránek R, Tilser I, and Kessler BM

International journal of experimental pathology 85(6):365-71, 2004 Dec - Who cited this? | PubMed ID: 15566433 | Fulltext

Recognition of phosphodegron motifs in human cyclin E by the SCF(Fbw7) ubiquitin ligase.

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Ye X, Nalepa G, Welcker M, Kessler BM, Spooner E, Qin J, Elledge SJ, Clurman BE, and Harper JW

The Journal of biological chemistry 279(48):50110, 2004 Nov 26 - Who cited this? | PubMed ID: 15364936 | Fulltext

Identification of proteins associated with murine cytomegalovirus virions.

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Kattenhorn LM, Mills R, Wagner M, Lomsadze A, Makeev V, Borodovsky M, Ploegh HL, and Kessler BM

Journal of virology 78(20):11187-97, 2004 Oct - Who cited this? | PubMed ID: 15452238 | Fulltext

Development of an isotope-coded activity-based probe for the quantitative profiling of cysteine proteases.

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van Swieten PF, Maehr R, van den Nieuwendijk AM, Kessler BM, Reich M, Wong CS, Kalbacher H, Leeuwenburgh MA, Driessen C, van der Marel GA, Ploegh HL, and Overkleeft HS

Bioorganic & medicinal chemistry letters 14(12):3131-4, 2004 Jun 21 - Who cited this? | PubMed ID: 15149659 | Fulltext

Acetylation of the C terminus of Ku70 by CBP and PCAF controls Bax-mediated apoptosis.

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Cohen HY, Lavu S, Bitterman KJ, Hekking B, Imahiyerobo TA, Miller C, Frye R, Ploegh H, Kessler BM, and Sinclair DA

Molecular cell 13(5):627-38, 2004 Mar 12 - Who cited this? | PubMed ID: 15023334 | Fulltext

Activity-based ubiquitin-specific protease (USP) profiling of virus-infected and malignant human cells.

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Ovaa H, Kessler BM, Rolén U, Galardy PJ, Ploegh HL, and Masucci MG

Proceedings of the National Academy of Sciences of the United States of America 101(8):2253-8, 2004 Feb 24 - Who cited this? | PubMed ID: 14982996 | Fulltext

Specific and covalent targeting of conjugating and deconjugating enzymes of ubiquitin-like proteins.

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Hemelaar J, Borodovsky A, Kessler BM, Reverter D, Cook J, Kolli N, Gan-Erdene T, Wilkinson KD, Gill G, Lima CD, Ploegh HL, and Ovaa H

Molecular and cellular biology 24(1):84-95, 2004 Jan - Who cited this? | PubMed ID: 14673145 | Fulltext

Chemistry-based functional proteomics: mechanism-based activity-profiling tools for ubiquitin and ubiquitin-like specific proteases.

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Hemelaar J, Galardy PJ, Borodovsky A, Kessler BM, Ploegh HL, and Ovaa H

Journal of proteome research 3(2):268-76, 2004 - Who cited this? | PubMed ID: 15113103 | Fulltext

A single protease, Apg4B, is specific for the autophagy-related ubiquitin-like proteins GATE-16, MAP1-LC3, GABARAP, and Apg8L.

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Hemelaar J, Lelyveld VS, Kessler BM, and Ploegh HL

The Journal of biological chemistry 278(51):51841-50, 2003 Dec 19 - Who cited this? | PubMed ID: 14530254 | Fulltext

Functional proteomics of the active cysteine protease content in Drosophila S2 cells.

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Kocks C, Maehr R, Overkleeft HS, Wang EW, Iyer LK, Lennon-Dumenil AM, Ploegh HL, and Kessler BM

Molecular & cellular proteomics : MCP 2(11):1188, 2003 Nov - Who cited this? | PubMed ID: 13130081 | Fulltext

Chemistry in living cells: detection of active proteasomes by a two-step labeling strategy.

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Ovaa H, van Swieten PF, Kessler BM, Leeuwenburgh MA, Fiebiger E, van den Nieuwendijk AM, Galardy PJ, van der Marel GA, Ploegh HL, and Overkleeft HS

Angewandte Chemie (International ed. in English) 42(31):3626-9, 2003 Aug 11 - Who cited this? | PubMed ID: 12916032 | Fulltext

Structure and reactivity of an asymmetric complex between HslV and I-domain deleted HslU, a prokaryotic homolog of the eukaryotic proteasome.

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Kwon AR, Kessler BM, Overkleeft HS, and McKay DB

Journal of molecular biology 330(2):185-95, 2003 Jul 4 - Who cited this? | PubMed ID: 12823960 | Fulltext

MHC class I antigen processing regulated by cytosolic proteolysis-short cuts that alter peptide generation.

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Kessler BM, Glas R, and Ploegh HL

Molecular immunology 39(3-4):171-9, 2002 Oct - Who cited this? | PubMed ID: 12200049 | Fulltext

Chemistry-based functional proteomics reveals novel members of the deubiquitinating enzyme family.

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Borodovsky A, Ovaa H, Kolli N, Gan-Erdene T, Wilkinson KD, Ploegh HL, and Kessler BM

Chemistry & biology 9(10):1149-59, 2002 Oct - Who cited this? | PubMed ID: 12401499 | Fulltext

Crystal structure of HslUV complexed with a vinyl sulfone inhibitor: corroboration of a proposed mechanism of allosteric activation of HslV by HslU.

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Sousa MC, Kessler BM, Overkleeft HS, and McKay DB

Journal of molecular biology 318(3):779-85, 2002 May 3 - Who cited this? | PubMed ID: 12054822 | Fulltext

A novel active site-directed probe specific for deubiquitylating enzymes reveals proteasome association of USP14.

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Borodovsky A, Kessler BM, Casagrande R, Overkleeft HS, Wilkinson KD, and Ploegh HL

The EMBO journal 20(18):5187-96, 2001 Sep 17 - Who cited this? | PubMed ID: 11566882 | Fulltext

Extended peptide-based inhibitors efficiently target the proteasome and reveal overlapping specificities of the catalytic beta-subunits.

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Kessler BM, Tortorella D, Altun M, Kisselev AF, Fiebiger E, Hekking BG, Ploegh HL, and Overkleeft HS

Chemistry & biology 8(9):913, 2001 Sep - Who cited this? | PubMed ID: 11564559 | Fulltext

LMP2 expression and proteasome activity in NOD mice.

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Kessler BM, Lennon-Duménil AM, Shinohara ML, Lipes MA, and Ploegh HL

Nature medicine 6(10):1064; author reply 1065-6, 2000 Oct - Who cited this? | PubMed ID: 11017111 | Fulltext

Integration of the ubiquitin-proteasome pathway with a cytosolic oligopeptidase activity.

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Wang EW, Kessler BM, Borodovsky A, Cravatt BF, Bogyo M, Ploegh HL, and Glas R

Proceedings of the National Academy of Sciences of the United States of America 97(18):9990-5, 2000 Aug 29 - Who cited this? | PubMed ID: 10954757 | Fulltext

Effects of epitope modification on T cell receptor-ligand binding and antigen recognition by seven H-2Kd-restricted cytotoxic T lymphocyte clones specific for a photoreactive peptide derivative.

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Kessler BM, Bassanini P, Cerottini JC, and Luescher IF

The Journal of experimental medicine 185(4):629-40, 1997 Feb 17 - Who cited this? | PubMed ID: 9034142 | Fulltext

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