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Papers authored by Deniz AA

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Microfluidic device for single-molecule experiments with enhanced photostability.

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Lemke EA, Gambin Y, Vandelinder V, Brustad EM, Liu HW, Schultz PG, Groisman A, and Deniz AA

Journal of the American Chemical Society 131(38):13610-2, 2009 Sep 30 - Who cited this? | PubMed ID: 19772358 | Fulltext

Direct single-molecule observation of a protein living in two opposed native structures.

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Gambin Y, Schug A, Lemke EA, Lavinder JJ, Ferreon AC, Magliery TJ, Onuchic JN, and Deniz AA

Proceedings of the National Academy of Sciences of the United States of America 106(25):10153-8, 2009 Jun 23 - Who cited this? | PubMed ID: 19506258 | Fulltext

Interplay of alpha-synuclein binding and conformational switching probed by single-molecule fluorescence.

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Ferreon AC, Gambin Y, Lemke EA, and Deniz AA

Proceedings of the National Academy of Sciences of the United States of America 106(14):5645-50, 2009 Apr 7 - Who cited this? | PubMed ID: 19293380 | Fulltext

A general and efficient method for the site-specific dual-labeling of proteins for single molecule fluorescence resonance energy transfer.

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Brustad EM, Lemke EA, Schultz PG, and Deniz AA

Journal of the American Chemical Society 130(52):17664-5, 2008 Dec 31 - Who cited this? | PubMed ID: 19108697 | Fulltext

Direct and selective elimination of specific prions and amyloids by 4,5-dianilinophthalimide and analogs.

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Wang H, Duennwald ML, Roberts BE, Rozeboom LM, Zhang YL, Steele AD, Krishnan R, Su LJ, Griffin D, Mukhopadhyay S, Hennessy EJ, Weigele P, Blanchard BJ, King J, Deniz AA, Buchwald SL,

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Proceedings of the National Academy of Sciences of the United States of America 105(20):7159, 2008 May 20 - Who cited this? | PubMed ID: 18480256 | Fulltext

Single-molecule biophysics: at the interface of biology, physics and chemistry.

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Deniz AA, Mukhopadhyay S, and Lemke EA

Journal of the Royal Society, Interface / the Royal Society 5(18):15-45, 2008 Feb 22 - Who cited this? | PubMed ID: 17519204 | Fulltext

Fluorescence from diffusing single molecules illuminates biomolecular structure and dynamics.

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Mukhopadhyay S and Deniz AA

Journal of fluorescence 17(6):775-83, 2007 Nov - Who cited this? | PubMed ID: 17641956 | Fulltext

Alpha-synuclein multistate folding thermodynamics: implications for protein misfolding and aggregation.

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Ferreon AC and Deniz AA

Biochemistry 46(15):4499, 2007 Apr 17 - Who cited this? | PubMed ID: 17378587 | Fulltext

A natively unfolded yeast prion monomer adopts an ensemble of collapsed and rapidly fluctuating structures.

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Mukhopadhyay S, Krishnan R, Lemke EA, Lindquist S, and Deniz AA

Proceedings of the National Academy of Sciences of the United States of America 104(8):2649, 2007 Feb 20 - Who cited this? | PubMed ID: 17299036 | Fulltext

The effects of antibodies on stilbene excited-state energetics.

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Tian F, Debler EW, Millar DP, Deniz AA, Wilson IA, and Schultz PG

Angewandte Chemie (International ed. in English) 45(46):7763-5, 2006 Nov 27 - Who cited this? | PubMed ID: 17089439 | Fulltext

siRNA in human cells selectively localizes to target RNA sites.

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Berezhna SY, Supekova L, Supek F, Schultz PG, and Deniz AA

Proceedings of the National Academy of Sciences of the United States of America 103(20):7682-7, 2006 May 16 - Who cited this? | PubMed ID: 16684885 | Fulltext

Fluorescence quenching by TEMPO: a sub-30 A single-molecule ruler.

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Zhu P, Clamme JP, and Deniz AA

Biophysical journal 89(5), 2005 Nov - Who cited this? | PubMed ID: 16199509 | Fulltext

Three-color single-molecule fluorescence resonance energy transfer.

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Clamme JP and Deniz AA

Chemphyschem : a European journal of chemical physics and physical chemistry 6(1):74-7, 2005 Jan - Who cited this? | PubMed ID: 15688649 | Fulltext

Freely diffusing single hairpin ribozymes provide insights into the role of secondary structure and partially folded states in RNA folding.

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Pljevaljcić G, Millar DP, and Deniz AA

Biophysical journal 87(1):457, 2004 Jul - Who cited this? | PubMed ID: 15240479 | Fulltext

Unnatural amino acid mutagenesis of green fluorescent protein.

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Wang L, Xie J, Deniz AA, and Schultz PG

The Journal of organic chemistry 68(1):174-6, 2003 Jan 10 - Who cited this? | PubMed ID: 12515477 | Fulltext

Monitoring the conformational fluctuations of DNA hairpins using single-pair fluorescence resonance energy transfer.

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Grunwell JR, Glass JL, Lacoste TD, Deniz AA, Chemla DS, and Schultz PG

Journal of the American Chemical Society 123(18):4295-303, 2001 May 9 - Who cited this? | PubMed ID: 11457196 | Fulltext

Ratiometric single-molecule studies of freely diffusing biomolecules.

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Deniz AA, Laurence TA, Dahan M, Chemla DS, Schultz PG, and Weiss S

Annual review of physical chemistry 52:233-53, 2001 - Who cited this? | PubMed ID: 11326065 | Fulltext

Single-molecule protein folding: diffusion fluorescence resonance energy transfer studies of the denaturation of chymotrypsin inhibitor 2.

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Deniz AA, Laurence TA, Beligere GS, Dahan M, Martin AB, Chemla DS, Dawson PE, Schultz PG, and Weiss S

Proceedings of the National Academy of Sciences of the United States of America 97(10):5179-84, 2000 May 9 - Who cited this? | PubMed ID: 10792044 | Fulltext

Single-pair fluorescence resonance energy transfer on freely diffusing molecules: observation of Förster distance dependence and subpopulations.

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Deniz AA, Dahan M, Grunwell JR, Ha T, Faulhaber AE, Chemla DS, Weiss S, and Schultz PG

Proceedings of the National Academy of Sciences of the United States of America 96(7):3670-5, 1999 Mar 30 - Who cited this? | PubMed ID: 10097095 | Fulltext

Single-molecule fluorescence spectroscopy of enzyme conformational dynamics and cleavage mechanism.

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Ha T, Ting AY, Liang J, Caldwell WB, Deniz AA, Chemla DS, Schultz PG, and Weiss S

Proceedings of the National Academy of Sciences of the United States of America 96(3):893-8, 1999 Feb 2 - Who cited this? | PubMed ID: 9927664 | Fulltext

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