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Papers authored by Das R

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Simultaneous prediction of protein folding and docking at high resolution.

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Das R, André I, Shen Y, Wu Y, Lemak A, Bansal S, Arrowsmith CH, Szyperski T, and Baker D

Proceedings of the National Academy of Sciences of the United States of America 106(45):18978-83, 2009 Nov 10 - Who cited this? | PubMed ID: 19864631 | Fulltext

Superstitious conditioning as a model of delusion formation following chronic but not acute ketamine in humans.

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Freeman TP, Morgan CJ, Klaassen E, Das RK, Stefanovic A, Brandner B, and Curran HV

Psychopharmacology 206(4):563-73, 2009 Nov - Who cited this? | PubMed ID: 19436994 | Fulltext

Antimicrobial susceptibility of bacteria isolated from urine samples obtained from nursing home residents.

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Das R, Perrelli E, Towle V, Van Ness PH, and Juthani-Mehta M

Infection control and hospital epidemiology : the official journal of the Society of Hospital Epidemiologists of America 30(11):1116-9, 2009 Nov - Who cited this? | PubMed ID: 19785518 | Fulltext

Chemical genomics in Escherichia coli identifies an inhibitor of bacterial lipoprotein targeting.

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Pathania R, Zlitni S, Barker C, Das R, Gerritsma DA, Lebert J, Awuah E, Melacini G, Capretta FA, and Brown ED

Nature chemical biology 5(11):849-56, 2009 Nov - Who cited this? | PubMed ID: 19783991 | Fulltext

The cellular and molecular immune response of the weanling piglet to staphylococcal enterotoxin B.

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Bi S, Das R, Zelazowska E, Mani S, Neill R, Coleman GD, Yang DC, Hammamieh R, Shupp JW, and Jett M

Experimental biology and medicine (Maywood, N.J.) 234(11):1305-15, 2009 Nov - Who cited this? | PubMed ID: 19855072 | Fulltext

Naive CD4 T cells from aged mice show enhanced death upon primary activation.

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Mattoo H, Faulkner M, Kandpal U, Das R, Lewis V, George A, Rath S, Durdik JM, and Bal V

International immunology 21(11):1277-89, 2009 Nov - Who cited this? | PubMed ID: 19748905 | Fulltext

Unusually slow proton transfer dynamics of a 3-hydroxychromone dye in protic solvents.

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Das R, Klymchenko AS, Duportail G, and Mély Y

Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology 8(11):1583-9, 2009 Nov - Who cited this? | PubMed ID: 19862417 | Fulltext

A Hidden Markov Model for Single Particle Tracks Quantifies Dynamic Interactions between LFA-1 and the Actin Cytoskeleton.

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Das R, Cairo CW, and Coombs D

PLoS computational biology 5(11):e1000556, 2009 Nov - Who cited this? | PubMed ID: 19893741 | Fulltext

Ultrabroadband midinfrared generation by using group-velocity-dispersion tailoring in a Bragg reflection waveguide for a difference-frequency-generation process.

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Das R and Thyagarajan K

Applied optics 48(30):5678-82, 2009 Oct 20 - Who cited this? | PubMed ID: 19844300 | Fulltext

Randomized Clinical Trial Comparing Hepatitis B Vaccine Administered by 0, 6 and 14 Week versus 6, 10 and 14 Week Schedule in Healthy Infants.

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Das RR, Mathew JL, Ratho RK, and Dutta S

Journal of tropical pediatrics 55(5):328-31, 2009 Oct - Who cited this? | PubMed ID: 19264836 | Fulltext

Inhibition vs. enhancement of the nitrate-induced phototransformation of organic substrates by the (*)OH scavengers bicarbonate and carbonate.

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Vione D, Khanra S, Man SC, Maddigapu PR, Das R, Arsene C, Olariu RI, Maurino V, and Minero C

Water research 43(18):4718-28, 2009 Oct - Who cited this? | PubMed ID: 19699506 | Fulltext

Systematic review: standard- and double-dose proton pump inhibitors for the healing of severe erosive oesophagitis -- a mixed treatment comparison of randomized controlled trials.

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Edwards SJ, Lind T, Lundell L, and DAS R

Alimentary pharmacology & therapeutics 30(6):547-56, 2009 Sep 15 - Who cited this? | PubMed ID: 19558609 | Fulltext

On the modal characteristics of surface plasmon polaritons at a metal-Bragg interface at optical frequencies.

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Das R and Jha R

Applied optics 48(26):4904-8, 2009 Sep 10 - Who cited this? | PubMed ID: 19745852 | Fulltext

Silencing of TNF-alpha receptors coordinately suppresses TNF-alpha expression through NF-kappaB activation blockade in THP-1 macrophage.

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Verma N, Chaudhury I, Kumar D, and Das RH

FEBS letters 583(17):2968-74, 2009 Sep 3 - Who cited this? | PubMed ID: 19683526 | Fulltext

Enhanced flexor tendon healing through controlled delivery of PDGF-BB.

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Thomopoulos S, Das R, Silva MJ, Sakiyama-Elbert S, Harwood FL, Zampiakis E, Kim HM, Amiel D, and Gelberman RH

Journal of orthopaedic research : official publication of the Orthopaedic Research Society 27(9):1209-15, 2009 Sep - Who cited this? | PubMed ID: 19322789 | Fulltext

Biotic and abiotic controls on diurnal fluctuations in labile soil phosphorus of a wet tropical forest.

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Vandecar KL, Lawrence D, Wood T, Oberbauer SF, Das R, Tully K, and Schwendenmann L

Ecology 90(9):2547-55, 2009 Sep - Who cited this? | PubMed ID: 19769132 | Fulltext

Pediatric disorders of sex development.

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Kulkarni KP, Panigrahi I, Das R, Kaur S, and Marwaha RK

Indian journal of pediatrics 76(9):956-8, 2009 Sep - Who cited this? | PubMed ID: 19904513 | Fulltext

Dynamically driven ligand selectivity in cyclic nucleotide binding domains.

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Das R, Chowdhury S, Mazhab-Jafari MT, Sildas S, Selvaratnam R, and Melacini G

The Journal of biological chemistry 284(35):23682-96, 2009 Aug 28 - Who cited this? | PubMed ID: 19403523 | Fulltext

American Society of Radiation Oncology recommendations for documenting intensity-modulated radiation therapy treatments.

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IMRT Documentation Working Group, Holmes T, Das R, Low D, Yin FF, Balter J, Palta J, Eifel P, and FASTRO

International journal of radiation oncology, biology, physics 74(5):1311-8, 2009 Aug 1 - Who cited this? | PubMed ID: 19616738 | Fulltext

Continuous-wave optical parametric oscillator pumped by a fiber laser green source at 532 nm.

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Samanta GK, Kumar SC, Das R, and Ebrahim-Zadeh M

Optics letters 34(15):2255-7, 2009 Aug 1 - Who cited this? | PubMed ID: 19649062 | Fulltext

Zolendronate in osteogenesis imperfecta.

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Panigrahi I, Das RR, and Marwaha RK

Journal of pediatric endocrinology & metabolism : JPEM 22(8):763, 2009 Aug - Who cited this? | PubMed ID: 19845128 | Fulltext

Blockade of interleukin-6 signaling augments regulatory T-cell reconstitution and attenuates the severity of graft-versus-host disease.

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Chen X, Das R, Komorowski R, Beres A, Hessner MJ, Mihara M, and Drobyski WR

Blood 114(4):891-900, 2009 Jul 23 - Who cited this? | PubMed ID: 19491393 | Fulltext

L-type calcium channel blockers exert an antiinflammatory effect by suppressing expression of plasminogen receptors on macrophages.

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Das R, Burke T, Van Wagoner DR, and Plow EF

Circulation research 105(2):167-75, 2009 Jul 17 - Who cited this? | PubMed ID: 19520970 | Fulltext

Macroporous silicon based simple and efficient trapping platform for electrical detection of Salmonella typhimurium pathogens.

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Das RD, RoyChaudhuri C, Maji S, Das S, and Saha H

Biosensors & bioelectronics 24(11):3215-22, 2009 Jul 15 - Who cited this? | PubMed ID: 19477111 | Fulltext

Comparative growth pattern of multi drug resistance versus susceptible isolates of Mycobacterium tuberculosis in mice lungs.

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Dave S, Faujdar J, Kumar P, Gupta P, Das R, Parasher D, Chauhan DS, Natrajan M, Gupta UD, and Katoch VM

The Indian journal of medical research 130(1):58-62, 2009 Jul - Who cited this? | PubMed ID: 19700802 | Fulltext

Dynamic properties of molecular motors in the divided-pathway model.

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Das RK and Kolomeisky AB

Physical chemistry chemical physics : PCCP 11(24):4815-20, 2009 Jun 28 - Who cited this? | PubMed ID: 19506756 | Fulltext

Allosteric activation of E2-RING finger-mediated ubiquitylation by a structurally defined specific E2-binding region of gp78.

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Das R, Mariano J, Tsai YC, Kalathur RC, Kostova Z, Li J, Tarasov SG, McFeeters RL, Altieri AS, Ji X, Byrd RA, and Weissman AM

Molecular cell 34(6):674-85, 2009 Jun 26 - Who cited this? | PubMed ID: 19560420 | Fulltext

Mechanism for activation of the EGF receptor catalytic domain by the juxtamembrane segment.

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Jura N, Endres NF, Engel K, Deindl S, Das R, Lamers MH, Wemmer DE, Zhang X, and Kuriyan J

Cell 137(7):1293-307, 2009 Jun 26 - Who cited this? | PubMed ID: 19563760 | Fulltext

UGT1A1 gene polymorphisms in North Indian neonates presenting with unconjugated hyperbilirubinemia.

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Agrawal SK, Kumar P, Rathi R, Sharma N, DAS R, Prasad R, and Narang A

Pediatric research 65(6):675-80, 2009 Jun - Who cited this? | PubMed ID: 19430380 | Fulltext

Spectrum of Lactobacillus species present in healthy vagina of Indian women.

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Garg KB, Ganguli I, Das R, and Talwar GP

The Indian journal of medical research 129(6):652-7, 2009 Jun - Who cited this? | PubMed ID: 19692744 | Fulltext

Enolase-1 as a plasminogen receptor.

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Plow EF and Das R

Blood 113(22):5371-2, 2009 May 28 - Who cited this? | PubMed ID: 19478049 | Fulltext

Role of embCAB gene mutations in ethambutol resistance in Mycobacterium tuberculosis isolates from India.

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Jadaun GP, Das R, Upadhyay P, Chauhan DS, Sharma VD, and Katoch VM

International journal of antimicrobial agents 33(5):483-6, 2009 May - Who cited this? | PubMed ID: 19112008 | Fulltext

A robust peak detection method for RNA structure inference by high-throughput contact mapping.

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Kim J, Yu S, Shim B, Kim H, Min H, Chung EY, Das R, and Yoon S

Bioinformatics (Oxford, England) 25(9):1137-44, 2009 May 1 - Who cited this? | PubMed ID: 19246511 | Fulltext

An in vivo investigative protocol for HDR prostate brachytherapy using urethral and rectal thermoluminescence dosimetry.

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Toye W, Das R, Kron T, Franich R, Johnston P, and Duchesne G

Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology 91(2):243-8, 2009 May - Who cited this? | PubMed ID: 18954914 | Fulltext

Site-specific cleavage of HCV genomic RNA and its cloned core and NS5B genes by DNAzyme.

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Kumar D, Chaudhury I, Kar P, and Das RH

Journal of gastroenterology and hepatology 24(5):872-8, 2009 May - Who cited this? | PubMed ID: 19220662 | Fulltext

In vitro effect of fluoroquinolones against Mycobacterium tuberculosis isolates from Agra & Kanpur region of north India.

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Singh M, Chauhan DS, Gupta P, Das R, Srivastava RK, Upadhyay P, Singh P, Srivastava K, Faujdar J, Jaudaun GP, Yadav VS, Sharma VD, Venkatesan K, Sachan S, Sachan P, Katoch K,

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The Indian journal of medical research 129(5):542-7, 2009 May - Who cited this? | PubMed ID: 19675382 | Fulltext

Veterans' attitudes to influenza vaccination in the setting of shortage of vaccine, 2004-2005.

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Benin AL, Learsy-Cahill D, Das R, Kancir S, Welch B, and Martinello RA

Human vaccines 5(4), 2009 Apr 18 - Who cited this? | PubMed ID: 18948733 | Fulltext

Recovery potential after postnatal shoulder paralysis. An animal model of neonatal brachial plexus palsy.

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Kim HM, Galatz LM, Patel N, Das R, and Thomopoulos S

The Journal of bone and joint surgery. American volume 91(4):879-91, 2009 Apr - Who cited this? | PubMed ID: 19339573 | Fulltext

Acute and chronic effects of ketamine on semantic priming: modeling schizophrenia?.

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Stefanovic A, Brandner B, Klaassen E, Cregg R, Nagaratnam M, Bromley LM, Das RK, Rossell SL, Morgan CJ, and Curran HV

Journal of clinical psychopharmacology 29(2):124-33, 2009 Apr - Who cited this? | PubMed ID: 19512973 | Fulltext

Identification of environmental mycobacteria isolated from Agra, north India by conventional & molecular approaches.

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Parashar D, Das R, Chauhan DS, Sharma VD, Lavania M, Yadav VS, S Chauhan SV, and Katoch VM

The Indian journal of medical research 129(4):424-31, 2009 Apr - Who cited this? | PubMed ID: 19535838 | Fulltext

A rare cutaneous manifestation of acute myeloid leukaemia.

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Kotokey RK, Potsangham T, and Das R

Journal of the Indian Medical Association 107(4):252, 2009 Apr - Who cited this? | PubMed ID: 19810375 | Fulltext

Interleukin-23 secretion by donor antigen-presenting cells is critical for organ-specific pathology in graft-versus-host disease.

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Das R, Chen X, Komorowski R, Hessner MJ, and Drobyski WR

Blood 113(10):2352-62, 2009 Mar 5 - Who cited this? | PubMed ID: 19059877 | Fulltext

Removal of Densiron-68 with a 23-gauge transconjunctival vitrectomy system.

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Romano MR, Groenwald C, Das R, Stappler T, Wong D, and Heimann H

Eye (London, England) 23(3):715-7, 2009 Mar - Who cited this? | PubMed ID: 19151654 | Fulltext

Outcome of a workshop on applications of protein models in biomedical research.

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Schwede T, Sali A, Honig B, Levitt M, Berman HM, Jones D, Brenner SE, Burley SK, Das R, Dokholyan NV, Dunbrack RL, Fidelis K, Fiser A, Godzik A, Huang YJ, Humblet C,

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Structure (London, England : 1993) 17(2):151-9, 2009 Feb 13 - Who cited this? | PubMed ID: 19217386 | Fulltext

Coarse-grained modeling of large RNA molecules with knowledge-based potentials and structural filters.

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Jonikas MA, Radmer RJ, Laederach A, Das R, Pearlman S, Herschlag D, and Altman RB

RNA (New York, N.Y.) 15(2):189-99, 2009 Feb - Who cited this? | PubMed ID: 19144906 | Fulltext

Diagnosis of valvular heart disease through neural networks ensembles.

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Das R, Turkoglu I, and Sengur A

Computer methods and programs in biomedicine 93(2):185-91, 2009 Feb - Who cited this? | PubMed ID: 18951649 | Fulltext

Prospects for de novo phasing with de novo protein models.

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Das R and Baker D

Acta crystallographica. Section D, Biological crystallography 65(Pt 2):169-75, 2009 Feb - Who cited this? | PubMed ID: 19171972 | Fulltext

9-cis-canthaxanthin exhibits higher pro-apoptotic activity than all-trans-canthaxanthin isomer in THP-1 macrophage cells.

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Venugopalan V, Verma N, Gautam HK, Saradhi PP, and Das RH

Free radical research 43(2):100-5, 2009 Feb - Who cited this? | PubMed ID: 19148843 | Fulltext

Engineered macroporosity in single-wall carbon nanotube films.

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Das RK, Liu B, Reynolds JR, and Rinzler AG

Nano letters 9(2):677-83, 2009 Feb - Who cited this? | PubMed ID: 19170555 | Fulltext

Unexpected and abnormally low HDL cholesterol levels on combination hypolipidemic therapy.

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Unnikrishnan R, Das R, Jaydip R, Sudhakaran C, and Mohan V

The Journal of the Association of Physicians of India 57:180-1, 2009 Feb - Who cited this? | PubMed ID: 19582991 | Fulltext

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Papers authored by Das R

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