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Papers authored by Clark JW

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Direct Evidence that Bevacizumab, an Anti-VEGF Antibody, Up-regulates SDF1{alpha}, CXCR4, CXCL6, and Neuropilin 1 in Tumors from Patients with Rectal Cancer.

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Xu L, Duda DG, di Tomaso E, Ancukiewicz M, Chung DC, Lauwers GY, Samuel R, Shellito P, Czito BG, Lin PC, Poleski M, Bentley R, Clark JW, Willett CG, and Jain RK

Cancer research 69(20):7905-10, 2009 Oct 15 - Who cited this? | PubMed ID: 19826039 | Fulltext

Detecting network communities by propagating labels under constraints.

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Barber MJ and Clark JW

Physical review. E, Statistical, nonlinear, and soft matter physics 80(2 Pt 2):026129, 2009 Aug - Who cited this? | PubMed ID: 19792222 | Fulltext

Efficacy, safety, and biomarkers of neoadjuvant bevacizumab, radiation therapy, and fluorouracil in rectal cancer: a multidisciplinary phase II study.

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Willett CG, Duda DG, di Tomaso E, Boucher Y, Ancukiewicz M, Sahani DV, Lahdenranta J, Chung DC, Fischman AJ, Lauwers GY, Shellito P, Czito BG, Wong TZ, Paulson E, Poleski M, Vujaskovic Z,

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Journal of clinical oncology : official journal of the American Society of Clinical Oncology 27(18):3020-6, 2009 Jun 20 - Who cited this? | PubMed ID: 19470921 | Fulltext

Efficacy, safety, and potential biomarkers of sunitinib monotherapy in advanced hepatocellular carcinoma: a phase II study.

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Zhu AX, Sahani DV, Duda DG, di Tomaso E, Ancukiewicz M, Catalano OA, Sindhwani V, Blaszkowsky LS, Yoon SS, Lahdenranta J, Bhargava P, Meyerhardt J, Clark JW, Kwak EL, Hezel AF, Miksad R,

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Journal of clinical oncology : official journal of the American Society of Clinical Oncology 27(18):3027-35, 2009 Jun 20 - Who cited this? | PubMed ID: 19470923 | Fulltext

Comparison between two super-resolution implementations in PET imaging.

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Chang G, Pan T, Qiao F, Clark JW, and Mawlawi OR

Medical physics 36(4):1370-83, 2009 Apr - Who cited this? | PubMed ID: 19472644 | Fulltext

Weekly docetaxel, cisplatin, and irinotecan (TPC): results of a multicenter phase II trial in patients with metastatic esophagogastric cancer.

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Enzinger PC, Ryan DP, Clark JW, Muzikansky A, Earle CC, Kulke MH, Meyerhardt JA, Blaszkowsky LS, Zhu AX, Fidias P, Vincitore MM, Mayer RJ, and Fuchs CS

Annals of oncology : official journal of the European Society for Medical Oncology / ESMO 20(3):475-80, 2009 Mar - Who cited this? | PubMed ID: 19139178 | Fulltext

Speckle tracking in intracardiac echocardiography for the assessment of myocardial deformation.

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Yue Y, Clark JW, and Khoury DS

IEEE transactions on bio-medical engineering 56(2):416-25, 2009 Feb - Who cited this? | PubMed ID: 19272903 | Fulltext

Oral mTOR Inhibitor Everolimus in Patients With Gemcitabine-Refractory Metastatic Pancreatic Cancer.

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Wolpin BM, Hezel AF, Abrams T, Blaszkowsky LS, Meyerhardt JA, Chan JA, Enzinger PC, Allen B, Clark JW, Ryan DP, and Fuchs CS

Journal of clinical oncology : official journal of the American Society of Clinical Oncology 27(2):193-8, 2009 Jan 10 - Who cited this? | PubMed ID: 19047305 | Fulltext

O6-methylguanine DNA methyltransferase deficiency and response to temozolomide-based therapy in patients with neuroendocrine tumors.

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Kulke MH, Hornick JL, Frauenhoffer C, Hooshmand S, Ryan DP, Enzinger PC, Meyerhardt JA, Clark JW, Stuart K, Fuchs CS, and Redston MS

Clinical cancer research : an official journal of the American Association for Cancer Research 15(1):338-45, 2009 Jan 1 - Who cited this? | PubMed ID: 19118063 | Fulltext

Phase I and pharmacokinetic study of gimatecan given orally once a week for 3 of 4 weeks in patients with advanced solid tumors.

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Zhu AX, Ready N, Clark JW, Safran H, Amato A, Salem N, Pace S, He X, Zvereva N, Lynch TJ, Ryan DP, and Supko JG

Clinical cancer research : an official journal of the American Association for Cancer Research 15(1):374-81, 2009 Jan 1 - Who cited this? | PubMed ID: 19118068 | Fulltext

Commentary: sorafenib use in patients with advanced hepatocellular carcinoma and underlying child-pugh B cirrhosis--evidence and controversy.

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Zhu AX and Clark JW

The oncologist 14(1):67-9, 2009 Jan - Who cited this? | PubMed ID: 19147690 | Fulltext

Long term survivors with metastatic pancreatic adenocarcinoma treated with gemcitabine: a retrospective analysis.

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Goulart BH, Clark JW, Lauwers GY, Ryan DP, Grenon N, Muzikansky A, and Zhu AX

Journal of hematology and oncology 2:13, 2009 - Who cited this? | PubMed ID: 19291303 | Fulltext

Using a human cardiovascular-respiratory model to characterize cardiac tamponade and pulsus paradoxus.

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Ramachandran D, Luo C, Ma TS, and Clark JW

Theoretical biology & medical modelling 6:15, 2009 - Who cited this? | PubMed ID: 19656411 | Fulltext

Contextual interactions in a generalized energy model of complex cells.

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Dellen BK, Clark JW, and Wessel R

Spatial vision 22(4):301-24, 2009 - Who cited this? | PubMed ID: 19622286 | Fulltext

Optimization of super-resolution processing using incomplete image sets in PET imaging.

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Chang G, Pan T, Clark JW, and Mawlawi OR

Medical physics 35(12):5748-57, 2008 Dec - Who cited this? | PubMed ID: 19175132 | Fulltext

A mechanical model of the human heart relating septal function to myocardial work and energy.

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Luo C, Ware DL, Zwischenberger JB, and Clark JW

Cardiovascular engineering (Dordrecht, Netherlands) 8(3):174-84, 2008 Sep - Who cited this? | PubMed ID: 18543102 | Fulltext

Describing, diagnosing, and naming psychopathy: how do youth psychopathy labels influence jurors?.

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Boccaccini MT, Murrie DC, Clark JW, and Cornell DG

Behavioral sciences & the law 26(4):487, 2008 Aug 5 - Who cited this? | PubMed ID: 18683203 | Fulltext

Systemic therapy for metastatic colorectal cancer: current questions.

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Zuckerman DS and Clark JW

Cancer 112(9):1879-91, 2008 May 1 - Who cited this? | PubMed ID: 18338815 | Fulltext

Critical dynamics of randomly assembled and diluted threshold networks.

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Kürten KE and Clark JW

Physical review. E, Statistical, nonlinear, and soft matter physics 77(4 Pt 2):46116, 2008 Apr - Who cited this? | PubMed ID: 18517699 | Fulltext

Joint model of motion and anatomy for PET image reconstruction.

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Qiao F, Pan T, Clark JW, and Mawlawi O

Medical physics 34(12):4626-39, 2007 Dec - Who cited this? | PubMed ID: 18196790 | Fulltext

Trends in the use and role of biomarkers in phase I oncology trials.

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Goulart BH, Clark JW, Pien HH, Roberts TG, Finkelstein SN, and Chabner BA

Clinical cancer research : an official journal of the American Association for Cancer Research 13(22):6719-26, 2007 Nov 15 - Who cited this? | PubMed ID: 18006773 | Fulltext

Capecitabine plus erlotinib in gemcitabine-refractory advanced pancreatic cancer.

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Kulke MH, Blaszkowsky LS, Ryan DP, Clark JW, Meyerhardt JA, Zhu AX, Enzinger PC, Kwak EL, Muzikansky A, Lawrence C, and Fuchs CS

Journal of clinical oncology : official journal of the American Society of Clinical Oncology 25(30):4787-92, 2007 Oct 20 - Who cited this? | PubMed ID: 17947726 | Fulltext

Phase I study of gefitinib, irinotecan, 5-fluorouracil and leucovorin in patients with metastatic colorectal cancer.

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Meyerhardt JA, Clark JW, Supko JG, Eder JP, Ogino S, Stewart CF, D'Amato F, Dancey J, Enzinger PC, Zhu AX, Ryan DP, Earle CC, Mayer RJ, Michelini A, Kinsella K, and Fuchs CS

Cancer chemotherapy and pharmacology 60(5):661-70, 2007 Oct - Who cited this? | PubMed ID: 17216531 | Fulltext

Repeated light-dark phase shifts modulate voluntary ethanol intake in male and female high alcohol-drinking (HAD1) rats.

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Clark JW, Fixaris MC, Belanger GV, and Rosenwasser AM

Alcoholism, clinical and experimental research 31(10):1699-706, 2007 Oct - Who cited this? | PubMed ID: 17681032 | Fulltext

Targeted agents: the rules of combination.

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Kwak EL, Clark JW, and Chabner B

Clinical cancer research : an official journal of the American Association for Cancer Research 13(18 Pt 1):5232-7, 2007 Sep 15 - Who cited this? | PubMed ID: 17875749 | Fulltext

Improved quantum hard-sphere ground-state equations of state.

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Solís MA, de Llano M, Clark JW, and Baker GA

Physical review. E, Statistical, nonlinear, and soft matter physics 76(3 Pt 1):031125, 2007 Sep - Who cited this? | PubMed ID: 17930217 | Fulltext

Phase 2 study of cetuximab in patients with advanced hepatocellular carcinoma.

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Zhu AX, Stuart K, Blaszkowsky LS, Muzikansky A, Reitberg DP, Clark JW, Enzinger PC, Bhargava P, Meyerhardt JA, Horgan K, Fuchs CS, and Ryan DP

Cancer 110(3):581-9, 2007 Aug 1 - Who cited this? | PubMed ID: 17583545 | Fulltext

Targeted therapy in rectal cancer.

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Willett CG, Duda DG, Czito BG, Bendell JC, Clark JW, and Jain RK

Oncology (Williston Park, N.Y.) 21(9):1055-65; discussion 1065, 1070, 1075 passim, 2007 Aug - Who cited this? | PubMed ID: 17910311 | Fulltext

Merging of single-particle levels and non-Fermi-liquid behavior of finite Fermi systems.

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Khodel VA, Clark JW, Li H, and Zverev MV

Physical review letters 98(21):216404, 2007 May 25 - Who cited this? | PubMed ID: 17677793 | Fulltext

Region of interest motion compensation for PET image reconstruction.

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Qiao F, Pan T, Clark JW, and Mawlawi OR

Physics in medicine and biology 52(10):2675-89, 2007 May 21 - Who cited this? | PubMed ID: 17473344 | Fulltext

CpG island methylation, response to combination chemotherapy, and patient survival in advanced microsatellite stable colorectal carcinoma.

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Ogino S, Meyerhardt JA, Kawasaki T, Clark JW, Ryan DP, Kulke MH, Enzinger PC, Wolpin BM, Loda M, and Fuchs CS

Virchows Archiv : an international journal of pathology 450(5):529-37, 2007 May - Who cited this? | PubMed ID: 17372756 | Fulltext

Safety, pharmacokinetics, and preliminary antitumor activity of sorafenib: a review of four phase I trials in patients with advanced refractory solid tumors.

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Strumberg D, Clark JW, Awada A, Moore MJ, Richly H, Hendlisz A, Hirte HW, Eder JP, Lenz HJ, and Schwartz B

The oncologist 12(4):426-37, 2007 Apr - Who cited this? | PubMed ID: 17470685 | Fulltext

Using a human cardiopulmonary model to study and predict normal and diseased ventricular mechanics, septal interaction, and atrio-ventricular blood flow patterns.

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Luo C, Ware DL, Zwischenberger JB, and Clark JW

Cardiovascular engineering (Dordrecht, Netherlands) 7(1):17-31, 2007 Mar - Who cited this? | PubMed ID: 17334942 | Fulltext

Phase I and pharmacokinetic study of S-1 administered for 14 days in a 21-day cycle in patients with advanced upper gastrointestinal cancer.

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Zhu AX, Clark JW, Ryan DP, Meyerhardt JA, Enzinger PC, Earle CC, Fuchs CS, Regan E, Anbe H, Houghton M, Zhang J, Urrea P, and Kulke MH

Cancer chemotherapy and pharmacology 59(3):285-93, 2007 Feb - Who cited this? | PubMed ID: 16786333 | Fulltext

Phase I clinical trial of bortezomib in combination with gemcitabine in patients with advanced solid tumors.

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Ryan DP, Appleman LJ, Lynch T, Supko JG, Fidias P, Clark JW, Fishman M, Zhu AX, Enzinger PC, Kashala O, Cusack J, and Eder JP

Cancer 107(10):2482-9, 2006 Nov 15 - Who cited this? | PubMed ID: 17036355 | Fulltext

Fatal sporotrichosis.

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Yelverton CB, Stetson CL, Bang RH, Clark JW, and Butler DF

Cutis; cutaneous medicine for the practitioner 78(4):253-6, 2006 Oct - Who cited this? | PubMed ID: 17121061 | Fulltext

Phase I study of gefitinib plus FOLFIRI in previously untreated patients with metastatic colorectal cancer.

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Wolpin BM, Clark JW, Meyerhardt JA, Earle CC, Ryan DP, Enzinger PC, Zhu AX, Blaszkowsky L, Battu S, and Fuchs CS

Clinical colorectal cancer 6(3):208-13, 2006 Sep - Who cited this? | PubMed ID: 17026790 | Fulltext

A motion-incorporated reconstruction method for gated PET studies.

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Qiao F, Pan T, Clark JW, and Mawlawi OR

Physics in medicine and biology 51(15):3769-83, 2006 Aug 7 - Who cited this? | PubMed ID: 16861780 | Fulltext

Epidermal growth factor receptor kinase domain mutations in esophageal and pancreatic adenocarcinomas.

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Kwak EL, Jankowski J, Thayer SP, Lauwers GY, Brannigan BW, Harris PL, Okimoto RA, Haserlat SM, Driscoll DR, Ferry D, Muir B, Settleman J, Fuchs CS, Kulke MH, Ryan DP, Clark JW,

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Clinical cancer research : an official journal of the American Association for Cancer Research 12(14 Pt 1):4283-7, 2006 Jul 15 - Who cited this? | PubMed ID: 16857803 | Fulltext

Phase I clinical trial of the farnesyltransferase inhibitor BMS-214662 administered as a weekly 24 h continuous intravenous infusion in patients with advanced solid tumors.

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Eder JP, Ryan DP, Appleman L, Zhu AX, Puchalski T, He X, Sonnichsen DS, Cooper M, Wright J, Clark JW, and Supko JG

Cancer chemotherapy and pharmacology 58(1):107-16, 2006 Jul - Who cited this? | PubMed ID: 16362299 | Fulltext

A phase II trial of irinotecan and cisplatin in patients with metastatic neuroendocrine tumors.

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Kulke MH, Wu B, Ryan DP, Enzinger PC, Zhu AX, Clark JW, Earle CC, Michelini A, and Fuchs CS

Digestive diseases and sciences 51(6):1033-8, 2006 Jun - Who cited this? | PubMed ID: 16865563 | Fulltext

Efficacy of cetuximab after treatment with oral epidermal growth factor receptor tyrosine kinase inhibitor-based chemotherapy in metastatic colorectal cancer.

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Meyerhardt JA, Heseltine D, Ogino S, Clark JW, Enzinger PC, Ryan DP, Earle CC, Zhu AX, and Fuchs CS

Clinical colorectal cancer 6(1):59-65, 2006 May - Who cited this? | PubMed ID: 16796793 | Fulltext

Phase II study of capecitabine, oxaliplatin, and erlotinib in previously treated patients with metastastic colorectal cancer.

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Meyerhardt JA, Zhu AX, Enzinger PC, Ryan DP, Clark JW, Kulke MH, Earle CC, Vincitore M, Michelini A, Sheehan S, and Fuchs CS

Journal of clinical oncology : official journal of the American Society of Clinical Oncology 24(12):1892, 2006 Apr 20 - Who cited this? | PubMed ID: 16622264 | Fulltext

Phase II study of gemcitabine and oxaliplatin in combination with bevacizumab in patients with advanced hepatocellular carcinoma.

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Zhu AX, Blaszkowsky LS, Ryan DP, Clark JW, Muzikansky A, Horgan K, Sheehan S, Hale KE, Enzinger PC, Bhargava P, and Stuart K

Journal of clinical oncology : official journal of the American Society of Clinical Oncology 24(12):1898, 2006 Apr 20 - Who cited this? | PubMed ID: 16622265 | Fulltext

Pooled safety analysis of BAY 43-9006 (sorafenib) monotherapy in patients with advanced solid tumours: Is rash associated with treatment outcome?.

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Strumberg D, Awada A, Hirte H, Clark JW, Seeber S, Piccart P, Hofstra E, Voliotis D, Christensen O, Brueckner A, and Schwartz B

European journal of cancer (Oxford, England : 1990) 42(4):548-56, 2006 Mar - Who cited this? | PubMed ID: 16426838 | Fulltext

Nonlinear multiscale wavelet diffusion for speckle suppression and edge enhancement in ultrasound images.

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Yue Y, Croitoru MM, Bidani A, Zwischenberger JB, and Clark JW

IEEE transactions on medical imaging 25(3):297-311, 2006 Mar - Who cited this? | PubMed ID: 16524086 | Fulltext

Hemodynamic analysis and design of a paracorporeal artificial lung device.

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Ha RR, Wang D, Zwischenberger JB, and Clark JW

Cardiovascular engineering (Dordrecht, Netherlands) 6(1):10-29, 2006 Mar - Who cited this? | PubMed ID: 16900418 | Fulltext

The combination of capecitabine and thalidomide in previously treated, refractory metastatic colorectal cancer.

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McCollum AD, Wu B, Clark JW, Kulke MH, Enzinger PC, Ryan DP, Earle CC, Michelini A, and Fuchs CS

American journal of clinical oncology 29(1):40-4, 2006 Feb - Who cited this? | PubMed ID: 16462501 | Fulltext

Pancreatoblastoma in a teenage patient.

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Bendell JC, Lauwers GY, Willett C, Clark JW, Warshaw AL, Wain JC, and Ryan DP

Clinical advances in hematology & oncology : H&O 4(2):150-3; discussion 154, 2006 Feb - Who cited this? | PubMed ID: 16728924 | Fulltext

A macrophage cell model for pH and volume regulation.

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Luo C, Clark JW, Heming TA, and Bidani A

Journal of theoretical biology 238(2):449-63, 2006 Jan 21 - Who cited this? | PubMed ID: 16043192 | Fulltext

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