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Papers authored by Bowman GR

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Constructing multi-resolution markov state models (msms) to elucidate RNA hairpin folding mechanisms.

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Huang X, Yao Y, Bowman GR, Sun J, Guibas LJ, Carlsson G, and Pande VS

Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing:228-39, 2010 - Who cited this? | PubMed ID: 19908375 | Fulltext

Using generalized ensemble simulations and Markov state models to identify conformational states.

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Bowman GR, Huang X, and Pande VS

Methods (San Diego, Calif.) 49(2):197-201, 2009 Oct - Who cited this? | PubMed ID: 19410002 | Fulltext

Progress and challenges in the automated construction of Markov state models for full protein systems.

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Bowman GR, Beauchamp KA, Boxer G, and Pande VS

The Journal of chemical physics 131(12):124101, 2009 Sep 28 - Who cited this? | PubMed ID: 19791846 | Fulltext

Topological methods for exploring low-density states in biomolecular folding pathways.

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Yao Y, Sun J, Huang X, Bowman GR, Singh G, Lesnick M, Guibas LJ, Pande VS, and Carlsson G

The Journal of chemical physics 130(14):144115, 2009 Apr 14 - Who cited this? | PubMed ID: 19368437 | Fulltext

Probing the nanosecond dynamics of a designed three-stranded Beta-sheet with a massively parallel molecular dynamics simulation.

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Voelz VA, Luttmann E, Bowman GR, and Pande VS

International journal of molecular sciences 10(3):1013-30, 2009 Mar - Who cited this? | PubMed ID: 19399235 | Fulltext

The roles of entropy and kinetics in structure prediction.

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Bowman GR and Pande VS

PLoS ONE 4(6):e5840, 2009 - Who cited this? | PubMed ID: 19513117 | Fulltext

A polymeric protein anchors the chromosomal origin/ParB complex at a bacterial cell pole.

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Bowman GR, Comolli LR, Zhu J, Eckart M, Koenig M, Downing KH, Moerner WE, Earnest T, and Shapiro L

Cell 134(6):945, 2008 Sep 19 - Who cited this? | PubMed ID: 18805090 | Fulltext

Super-resolution imaging in live Caulobacter crescentus cells using photoswitchable EYFP.

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Biteen JS, Thompson MA, Tselentis NK, Bowman GR, Shapiro L, and Moerner WE

Nature methods, 2008 Sep 15 - Who cited this? | PubMed ID: 18794860 | Fulltext

Simulated tempering yields insight into the low-resolution Rosetta scoring functions.

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Bowman GR and Pande VS

Proteins, 2008 Sep 2 - Who cited this? | PubMed ID: 18767152 | Fulltext

Structural Insight into RNA Hairpin Folding Intermediates.

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Bowman GR, Huang X, Yao Y, Sun J, Carlsson G, Guibas LJ, and Pande VS

Journal of the American Chemical Society, 2008 Jul 1 - Who cited this? | PubMed ID: 18593120 | Fulltext

Convergence of folding free energy landscapes via application of enhanced sampling methods in a distributed computing environment.

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Huang X, Bowman GR, and Pande VS

The Journal of chemical physics 128(20):205106, 2008 May 28 - Who cited this? | PubMed ID: 18513049 | Fulltext

Genetic, genomic, and functional analysis of the granule lattice proteins in Tetrahymena secretory granules.

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Cowan AT, Bowman GR, Edwards KF, Emerson JJ, and Turkewitz AP

Molecular biology of the cell 16(9):4046-60, 2005 Sep - Who cited this? | PubMed ID: 15958493 | Fulltext

Core formation and the acquisition of fusion competence are linked during secretory granule maturation in Tetrahymena.

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Bowman GR, Elde NC, Morgan G, Winey M, and Turkewitz AP

Traffic (Copenhagen, Denmark) 6(4):303-23, 2005 Apr - Who cited this? | PubMed ID: 15752136 | Fulltext

Microarray-based resequencing of multiple Bacillus anthracis isolates.

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Zwick ME, Mcafee F, Cutler DJ, Read TD, Ravel J, Bowman GR, Galloway DR, and Mateczun A

Genome biology 6(1), 2005 - Who cited this? | PubMed ID: 15642093 | Fulltext

Genomic and proteomic evidence for a second family of dense core granule cargo proteins in Tetrahymena thermophila.

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Bowman GR, Smith DG, Michael Siu KW, Pearlman RE, and Turkewitz AP

The Journal of eukaryotic microbiology 52(4):291-7, 2005 - Who cited this? | PubMed ID: 16014006 | Fulltext

Fibrolytic enzymes and parity effects on feeding behavior, salivation, and ruminal pH of lactating dairy cows.

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Bowman GR, Beauchemin KA, and Shelford JA

Journal of dairy science 86(2):565-75, 2003 Feb - Who cited this? | PubMed ID: 12647963 | Fulltext

The proportion of the diet to which fibrolytic enzymes are added affects nutrient digestion by lactating dairy cows.

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Bowman GR, Beauchemin KA, and Shelford JA

Journal of dairy science 85(12):3420-9, 2002 Dec - Who cited this? | PubMed ID: 12512615 | Fulltext

New class of cargo protein in Tetrahymena thermophila dense core secretory granules.

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Haddad A, Bowman GR, and Turkewitz AP

Eukaryotic cell 1(4):583-93, 2002 Aug - Who cited this? | PubMed ID: 12456006 | Fulltext

Analysis of a mutant exhibiting conditional sorting to dense core secretory granules in Tetrahymena thermophila.

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Bowman GR and Turkewitz AP

Genetics 159(4):1605-16, 2001 Dec - Who cited this? | PubMed ID: 11779800 | Fulltext

The gain-of-function Arabidopsis acd6 mutant reveals novel regulation and function of the salicylic acid signaling pathway in controlling cell death, defenses, and cell growth.

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Rate DN, Cuenca JV, Bowman GR, Guttman DS, and Greenberg JT

The Plant cell 11(9):1695-708, 1999 Sep - Who cited this? | PubMed ID: 10488236 | Fulltext

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