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Papers authored by Baker TA

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Structures of asymmetric ClpX hexamers reveal nucleotide-dependent motions in a AAA+ protein-unfolding machine.

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Glynn SE, Martin A, Nager AR, Baker TA, and Sauer RT

Cell 139(4):744-56, 2009 Nov 13 - Who cited this? | PubMed ID: 19914167 | Fulltext

Proteolysis in the SOS response and metal homeostasis in Escherichia coli.

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Pruteanu M and Baker TA

Research in microbiology 160(9):677-83, 2009 Nov - Who cited this? | PubMed ID: 19747971 | Fulltext

Mechanical loading of a long bone induces plasticity in sensory input to the central nervous system.

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Wu Q, Sample SJ, Baker TA, Thomas CF, Behan M, and Muir P

Neuroscience letters 463(3):254-7, 2009 Oct 9 - Who cited this? | PubMed ID: 19647783 | Fulltext

Engineering Synthetic Adaptors and Substrates for Controlled ClpXP Degradation.

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Davis JH, Baker TA, and Sauer RT

The Journal of biological chemistry 284(33):21848-55, 2009 Aug 14 - Who cited this? | PubMed ID: 19549779 | Fulltext

Polypeptide Translocation by the AAA+ ClpXP Protease Machine.

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Barkow SR, Levchenko I, Baker TA, and Sauer RT

Chemistry & biology 16(6):605-12, 2009 Jun 26 - Who cited this? | PubMed ID: 19549599 | Fulltext

Molecular basis of substrate selection by the N-end rule adaptor protein ClpS.

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Román-Hernández G, Grant RA, Sauer RT, and Baker TA

Proceedings of the National Academy of Sciences of the United States of America 106(22):8888-93, 2009 Jun 2 - Who cited this? | PubMed ID: 19451643 | Fulltext

Nature of cl bonding on the au(111) surface: evidence of a mainly covalent interaction.

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Baker TA, Friend CM, and Kaxiras E

Journal of the American Chemical Society 131(12):4551, 2009 Apr 1 - Who cited this? | PubMed ID: 19267430 | Fulltext

Effects of chlorine and oxygen coverage on the structure of the Au(111) surface.

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Baker TA, Friend CM, and Kaxiras E

The Journal of chemical physics 130(8):084701, 2009 Feb 28 - Who cited this? | PubMed ID: 19256613 | Fulltext

Controlled degradation by ClpXP protease tunes the levels of the excision repair protein UvrA to the extent of DNA damage.

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Pruteanu M and Baker TA

Molecular microbiology 71(4):912-24, 2009 Feb - Who cited this? | PubMed ID: 19183285 | Fulltext

Polyethylene glycol-based homologated ligands for nicotinic acetylcholine receptors.

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Scates BA, Lashbrook BL, Chastain BC, Tominaga K, Elliott BT, Theising NJ, Baker TA, and Fitch RW

Bioorganic & medicinal chemistry 16(24):10295-300, 2008 Dec 15 - Who cited this? | PubMed ID: 19006672 | Fulltext

The molecular basis of N-end rule recognition.

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Wang KH, Roman-Hernandez G, Grant RA, Sauer RT, and Baker TA

Molecular cell 32(3):406-14, 2008 Nov 7 - Who cited this? | PubMed ID: 18995838 | Fulltext

Pore loops of the AAA+ ClpX machine grip substrates to drive translocation and unfolding.

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Martin A, Baker TA, and Sauer RT

Nature structural & molecular biology 15(11):1147-51, 2008 Nov - Who cited this? | PubMed ID: 18931677 | Fulltext

Are behavioral interventions for arthritis effective with minorities? Addressing racial and ethnic diversity in disability and rehabilitation.

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McIlvane JM, Baker TA, Mingo CA, and Haley WE

Arthritis and rheumatism 59(10):1512-8, 2008 Oct 15 - Who cited this? | PubMed ID: 18821638 | Fulltext

Chlorine interaction with defects on the Au(111) surface: a first-principles theoretical investigation.

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Baker TA, Friend CM, and Kaxiras E

The Journal of chemical physics 129(10):104702, 2008 Sep 14 - Who cited this? | PubMed ID: 19044933 | Fulltext

Racial differences in arthritis-related stress, chronic life stress, and depressive symptoms among women with arthritis: a contextual perspective.

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McIlvane JM, Baker TA, and Mingo CA

The journals of gerontology. Series B, Psychological sciences and social sciences 63(5):S320-7, 2008 Sep - Who cited this? | PubMed ID: 18818453 | Fulltext

Explaining the relationship between pain and depressive symptoms in African-American and white women with arthritis.

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Mingo CA, McIlvane JM, and Baker TA

Journal of the National Medical Association 100(9):996-1003, 2008 Sep - Who cited this? | PubMed ID: 18807426 | Fulltext

Inaugural Article: Dissecting the roles of MuB in Mu transposition: ATP regulation of DNA binding is not essential for target delivery.

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Schweidenback CT and Baker TA

Proceedings of the National Academy of Sciences of the United States of America, 2008 Aug 21 - Who cited this? | PubMed ID: 18719126 | Fulltext

Transient hydroxyl formation from water on oxygen-covered Au(111).

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Quiller RG, Baker TA, Deng X, Colling ME, Min BK, and Friend CM

The Journal of chemical physics 129(6):64702, 2008 Aug 14 - Who cited this? | PubMed ID: 18715097 | Fulltext

Forced extraction of targeted components from complex macromolecular assemblies.

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Moore SD, Baker TA, and Sauer RT

Proceedings of the National Academy of Sciences of the United States of America, 2008 Aug 11 - Who cited this? | PubMed ID: 18695246 | Fulltext

Asymmetric nucleotide transactions of the HslUV protease.

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Yakamavich JA, Baker TA, and Sauer RT

Journal of molecular biology 380(5):946, 2008 Jul 25 - Who cited this? | PubMed ID: 18582897 | Fulltext

Tuning the strength of a bacterial N-end rule degradation signal.

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Wang KH, Oakes ES, Sauer RT, and Baker TA

The Journal of biological chemistry, 2008 Jun 11 - Who cited this? | PubMed ID: 18550545 | Fulltext

Factors influencing chronic pain intensity in older black women: examining depression, locus of control, and physical health.

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Baker TA, Buchanan NT, and Corson N

Journal of women's health (2002) 17(5):869, 2008 Jun - Who cited this? | PubMed ID: 18537488 | Fulltext

Unique contacts direct high-priority recognition of the tetrameric Mu transposase-DNA complex by the AAA+ unfoldase ClpX.

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Abdelhakim AH, Oakes EC, Sauer RT, and Baker TA

Molecular cell 30(1):39, 2008 Apr 11 - Who cited this? | PubMed ID: 18406325 | Fulltext

Nature of Cl bonding on the Au(111) surface: evidence of a mainly covalent interaction.

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Baker TA, Friend CM, and Kaxiras E

Journal of the American Chemical Society 130(12):3720, 2008 Mar 26 - Who cited this? | PubMed ID: 18314988 | Fulltext

Chlorine adsorption on Au(111): chlorine overlayer or surface chloride?.

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Gao W, Baker TA, Zhou L, Pinnaduwage DS, Kaxiras E, and Friend CM

Journal of the American Chemical Society 130(11):3560, 2008 Mar 19 - Who cited this? | PubMed ID: 18290645 | Fulltext

Distinct structural elements of the adaptor ClpS are required for regulating degradation by ClpAP.

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Hou JY, Sauer RT, and Baker TA

Nature structural & molecular biology 15(3):288, 2008 Mar - Who cited this? | PubMed ID: 18297088 | Fulltext

Role of interventional radiology in the management of complications after pancreaticoduodenectomy.

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Baker TA, Aaron JM, Borge M, Pierce K, Shoup M, and Aranha GV

American journal of surgery 195(3):386, 2008 Mar - Who cited this? | PubMed ID: 18308043 | Fulltext

Diverse pore loops of the AAA+ ClpX machine mediate unassisted and adaptor-dependent recognition of ssrA-tagged substrates.

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Martin A, Baker TA, and Sauer RT

Molecular cell 29(4):441, 2008 Feb 29 - Who cited this? | PubMed ID: 18313382 | Fulltext

Protein unfolding by a AAA+ protease is dependent on ATP-hydrolysis rates and substrate energy landscapes.

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Martin A, Baker TA, and Sauer RT

Nature structural & molecular biology 15(2):139, 2008 Feb - Who cited this? | PubMed ID: 18223658 | Fulltext

The dynamic Mu transpososome: MuB activation prevents disintegration.

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Lemberg KM, Schweidenback CT, and Baker TA

Journal of molecular biology 374(5):1158, 2007 Dec 14 - Who cited this? | PubMed ID: 17988683 | Fulltext

Obituary: arthur kornberg (1918-2007).

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Baker TA

Nature 450(7171):809, 2007 Dec 6 - Who cited this? | PubMed ID: 18063999 | Fulltext

Structure and substrate specificity of an SspB ortholog: design implications for AAA+ adaptors.

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Chien P, Grant RA, Sauer RT, and Baker TA

Structure (London, England : 1993) 15(10):1296, 2007 Oct - Who cited this? | PubMed ID: 17937918 | Fulltext

Distinct static and dynamic interactions control ATPase-peptidase communication in a AAA+ protease.

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Martin A, Baker TA, and Sauer RT

Molecular cell 27(1):41, 2007 Jul 6 - Who cited this? | PubMed ID: 17612489 | Fulltext

Direct and adaptor-mediated substrate recognition by an essential AAA+ protease.

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Chien P, Perchuk BS, Laub MT, Sauer RT, and Baker TA

Proceedings of the National Academy of Sciences of the United States of America 104(16):6590, 2007 Apr 17 - Who cited this? | PubMed ID: 17420450 | Fulltext

Altered tethering of the SspB adaptor to the ClpXP protease causes changes in substrate delivery.

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McGinness KE, Bolon DN, Kaganovich M, Baker TA, and Sauer RT

The Journal of biological chemistry 282(15):11465, 2007 Apr 13 - Who cited this? | PubMed ID: 17317664 | Fulltext

Ligand-controlled proteolysis of the Escherichia coli transcriptional regulator ZntR.

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Pruteanu M, Neher SB, and Baker TA

Journal of bacteriology 189(8):3017, 2007 Apr - Who cited this? | PubMed ID: 17220226 | Fulltext

ClpS modulates but is not essential for bacterial N-end rule degradation.

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Wang KH, Sauer RT, and Baker TA

Genes & development 21(4):403-8, 2007 Feb 15 - Who cited this? | PubMed ID: 17322400 | Fulltext

Altered specificity of a AAA+ protease.

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Farrell CM, Baker TA, and Sauer RT

Molecular cell 25(1):161, 2007 Jan 12 - Who cited this? | PubMed ID: 17218279 | Fulltext

Design principles of the proteolytic cascade governing the sigmaE-mediated envelope stress response in Escherichia coli: keys to graded, buffered, and rapid signal transduction.

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Chaba R, Grigorova IL, Flynn JM, Baker TA, and Gross CA

Genes & development 21(1):124, 2007 Jan 1 - Who cited this? | PubMed ID: 17210793 | Fulltext

ATP-dependent proteases of bacteria: recognition logic and operating principles.

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Baker TA and Sauer RT

Trends in biochemical sciences 31(12):647, 2006 Dec - Who cited this? | PubMed ID: 17074491 | Fulltext

Photovoice: use of a participatory action research method to explore the chronic pain experience in older adults.

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Baker TA and Wang CC

Qualitative health research 16(10):1405-13, 2006 Dec - Who cited this? | PubMed ID: 17079801 | Fulltext

A pathway for NH addition to styrene promoted by gold.

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Deng X, Baker TA, and Friend CM

Angewandte Chemie (International ed. in English) 45(42):7075-8, 2006 Oct 27 - Who cited this? | PubMed ID: 17013955 | Fulltext

Imaging nanostructures with scanning photoionization microscopy.

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Monti OL, Baker TA, and Nesbitt DJ

The Journal of chemical physics 125(15):154709, 2006 Oct 21 - Who cited this? | PubMed ID: 17059285 | Fulltext

Physical functioning in older blacks: an exploratory study identifying psychosocial and clinical predictors.

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Baker TA and Whitfield KE

Journal of the National Medical Association 98(7):1114-20, 2006 Jul - Who cited this? | PubMed ID: 16895281 | Fulltext

Engineering controllable protein degradation.

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McGinness KE, Baker TA, and Sauer RT

Molecular cell 22(5):701, 2006 Jun 9 - Who cited this? | PubMed ID: 16762842 | Fulltext

Proteomic profiling of ClpXP substrates after DNA damage reveals extensive instability within SOS regulon.

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Neher SB, Villén J, Oakes EC, Bakalarski CE, Sauer RT, Gygi SP, and Baker TA

Molecular cell 22(2):193, 2006 Apr 21 - Who cited this? | PubMed ID: 16630889 | Fulltext

Rebuilt AAA + motors reveal operating principles for ATP-fuelled machines.

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Martin A, Baker TA, and Sauer RT

Nature 437(7062):1115-20, 2005 Oct 20 - Who cited this? | PubMed ID: 16237435 | Fulltext

Specificity versus stability in computational protein design.

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Bolon DN, Grant RA, Baker TA, and Sauer RT

Proceedings of the National Academy of Sciences of the United States of America 102(36):12724, 2005 Sep 6 - Who cited this? | PubMed ID: 16129838 | Fulltext

Remodeling protein complexes: insights from the AAA+ unfoldase ClpX and Mu transposase.

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Burton BM and Baker TA

Protein science : a publication of the Protein Society 14(8):1945-54, 2005 Aug - Who cited this? | PubMed ID: 16046622 | Fulltext

Geometry of simple molecules. 2. Modeling the geometry of AX3E and AX2E2 molecules through the nonbonded interaction (NBI) model.

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See RF, Baker TA, and Kahler P

Inorganic chemistry 44(14):4961-8, 2005 Jul 11 - Who cited this? | PubMed ID: 15998023 | Fulltext

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